Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0550 ATGGCGTCTGGTCGTGGCTCCAAGGGTTTCGATTTTGGTTCTGATGATATCCTTTCTACCTATGAAGACTATGCCAATAACAACCATGATGAATTTTCTAATGGGATTCATAACAATGATCCCAGTAAGGATTTTAACAAACCAAGGATGCCTAGGACATCAGTATTTCCTGCTACTGCTTCACCTGAAGATTCTTTAAGCGGAGAAGTGATCTCAACTGTTGAGAATAGTATGAAAAAACATGCTGACAACCTTATGCGGTTTCTTGAGGGAATCAGTTCAAGGCTATCACAGTTGGAATTGTATTGCTACAATCTTGACAAATCAATTGGACAAATGCGATCTGATTTAAATAGTGACCATGGAGAGGCAGACTCAAAGCTCATATCTCTTGAGAAACATGTTCATGAAGTACACAGGTCTGTGCAAATTTTAAGAGAGAAGCAAGAGCTAGCCGAGACTCAGAAAGAATTAGTCAAGCTTCAACTTGCTCAGAAAGGGTCATCTTTCTCGAGCCATTCACAGTCCAACGAGGAGAAATCTTCACCTTCCGCCACAGATCCTAAAAGAACTGATAATAGTGCATCTGACACAAATAACCAGCAATTAGCTCTTGCTATACATCATCAACTTGCTCCCCAGCCACAGCCTGTGGCACCCCCCTCTCAAGCTCCAGCCCCAAATGTGACCCAAGGCACTCAACAATCTCCTCATTACATGCCTTACACCTCCATGCCCGTTCCGTCAGTTGTGACTCAGTTTCCTCAGAATCAGTATTTAAATTCTGATTCGCAATATCGAACTCCACAACCAACATCCTCTCAAGTAACCCAATCCCCACACGTTCAACAATTTTCCCAGTATCAGCAGCCGCAGCCGCAGCCACAGCAATGGCATCAGCATGTCCAACCTCCACAACCACCCTCGGTACAGCCTCAAATGAGACCCGCTTCGACAAATATTTATGCTCCATACCTTCCAAGCCAAGCTGCAAATTCATCTCCCACAGAAACACTGCCAACCAGCATGTCATTGCAAATGCTACCATATTCAGCGATTCCACCCCAAGGATCTAGCCATGGTGATGCCATACCATATGGATATAGCGGTACTGGTAGAACAGCTCCACAGCATCCTCCACCCCAGCAAATCAAGGGCTCTTTTCCGGTACAACCAGGGGATGTTTATGGAACTAGTGGGACCCACGCCACACTTCCTCCTGCTAGTGCATACATGGTGTATGATGGCGAGCGAGGCAGAACACATCATCCATCTCAACCTCCTCATTTTGCTCATGTTGGGTATCCTCCAACAAGTGCTTCCCTTCAGAACCCTGCACCACATAATCTTATTGTCCAGAACCCTAGCCCGTCGCAATTTATTGGTGGCCATCCCTACAATGAATTGATTGAGAAATTTGTGAGCATGGGATTTAGAGCTGATCATGCGGCAAGTGTGATCCAGAGGATGGTGGAAACTGGGCAGCCTATAGATTTTAACTCCGTGCTAGACCGGTTGAATGTGCGTAGTTCGGTGGGTCCCCAGAGGGGATGGTCCGGGTAA 1563 0.4613 MASGRGSKGFDFGSDDILSTYEDYANNNHDEFSNGIHNNDPSKDFNKPRMPRTSVFPATASPEDSLSGEVISTVENSMKKHADNLMRFLEGISSRLSQLELYCYNLDKSIGQMRSDLNSDHGEADSKLISLEKHVHEVHRSVQILREKQELAETQKELVKLQLAQKGSSFSSHSQSNEEKSSPSATDPKRTDNSASDTNNQQLALAIHHQLAPQPQPVAPPSQAPAPNVTQGTQQSPHYMPYTSMPVPSVVTQFPQNQYLNSDSQYRTPQPTSSQVTQSPHVQQFSQYQQPQPQPQQWHQHVQPPQPPSVQPQMRPASTNIYAPYLPSQAANSSPTETLPTSMSLQMLPYSAIPPQGSSHGDAIPYGYSGTGRTAPQHPPPQQIKGSFPVQPGDVYGTSGTHATLPPASAYMVYDGERGRTHHPSQPPHFAHVGYPPTSASLQNPAPHNLIVQNPSPSQFIGGHPYNELIEKFVSMGFRADHAASVIQRMVETGQPIDFNSVLDRLNVRSSVGPQRGWSG* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0550 520 MobiDBLite consensus disorder prediction 298 312 - -
Lan3g0550 520 MobiDBLite consensus disorder prediction 357 385 - -
Lan3g0550 520 MobiDBLite consensus disorder prediction 164 197 - -
Lan3g0550 520 MobiDBLite consensus disorder prediction 213 244 - -
Lan3g0550 520 Coils Coil 144 164 - -
Lan3g0550 520 Pfam UBA-like domain (DUF1421) 466 510 IPR010820 -
Lan3g0550 520 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 4 518 - -
Lan3g0550 520 MobiDBLite consensus disorder prediction 261 316 - -
Lan3g0550 520 MobiDBLite consensus disorder prediction 261 297 - -
Lan3g0550 520 MobiDBLite consensus disorder prediction 225 244 - -
Lan3g0550 520 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 4 518 - -
Lan3g0550 520 MobiDBLite consensus disorder prediction 28 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0550 Lan-Chr3 5821216 5824660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0550 465 520 Trihelix Transcription Factor Family AT5G14540 37.500 1.49e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0550 - - aip:107610486 632.098