Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan3g0483 | ATGGCCTCAAACTCAGGTTGGACAACAAAGCAGAACAAGAAGTTTGAGAATGCTTTGGCCATCTATGACAAGGACACGCCGGACCGGTGGCAGAAACTGGCCAGGGCCGTCGGAGGTAAGACGGTGGAGGAAGTGAAGATGCATTATGAGATGCTTGTGGAAGATTTGAAGCAGATTGAGGAAGGTCATGTTCCCTTGCCCAAATATAGAAATGTTTCAACTGTTGGAGGCAGCAATAAAGGTTGTAATTACATTGCTGCAGAACAAAGGATGAAGGTTCTAAGTCTTCAGTGA | 294 | 0.4592 | MASNSGWTTKQNKKFENALAIYDKDTPDRWQKLARAVGGKTVEEVKMHYEMLVEDLKQIEEGHVPLPKYRNVSTVGGSNKGCNYIAAEQRMKVLSLQ* | 98 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan3g0483 | 97 | CDD | SANT | 7 | 53 | IPR001005 | - | |
| Lan3g0483 | 97 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR-RELATED | 1 | 97 | IPR044636 | GO:0003700 | |
| Lan3g0483 | 97 | ProSiteProfiles | Myb-like domain profile. | 1 | 53 | IPR001005 | - | |
| Lan3g0483 | 97 | SUPERFAMILY | Homeodomain-like | 6 | 60 | IPR009057 | - | |
| Lan3g0483 | 97 | Gene3D | - | 1 | 66 | - | - | |
| Lan3g0483 | 97 | ProSiteProfiles | SANT domain profile. | 2 | 57 | IPR017884 | - | |
| Lan3g0483 | 97 | SMART | sant | 3 | 55 | IPR001005 | - | |
| Lan3g0483 | 97 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 97 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan3g0483 | Lan-Chr3 | 4444471 | 4445651 | Wgd |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | MYB-related | Lan3g0483 | None | None | None |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan3g0483 | - | - | gmx:100804049 | 159.844 |