Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0461 ATGGCTGCTGAAGAGGGACAAGTGATCGGTGTTCACAGTGTTGAGGCATGGAAGGAGCATATCGAGAAGGGAAAGCAGAGTCAGAAATTGATTGTGGTGGATTTTACCGCTTCTTGGTGTGGTCCTTGTCGCTTCATTGCCCCAATTCTAGCAGAGATTGCTAAAAACACGCCTGCAGTCACCTTCCTTAAGGTTGATGTGGATGAATTAAAGACTGTTGCTGAGGAATGGGGTATTCAGGCTATGCCAACCTTCCTGTTCTTGAAAGAAGGCAAAATTGTGGACACAGTGGTGGGTGCTAAGAAGGAAGAACTGCAACTGACAATAGTGAAGCATTCAACTGTTGCTTCTTCTTCTTCAAGTATCTTATGA 372 0.4489 MAAEEGQVIGVHSVEAWKEHIEKGKQSQKLIVVDFTASWCGPCRFIAPILAEIAKNTPAVTFLKVDVDELKTVAEEWGIQAMPTFLFLKEGKIVDTVVGAKKEELQLTIVKHSTVASSSSSIL* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0461 123 SUPERFAMILY Thioredoxin-like 5 112 IPR036249 -
Lan3g0461 123 CDD TRX_family 15 104 - -
Lan3g0461 123 Gene3D Glutaredoxin 1 119 - -
Lan3g0461 123 ProSitePatterns Thioredoxin family active site. 32 50 IPR017937 -
Lan3g0461 123 TIGRFAM thioredoxin: thioredoxin 23 108 IPR005746 GO:0015035
Lan3g0461 123 PANTHER THIOREDOXIN 3 119 - -
Lan3g0461 123 ProSiteProfiles Thioredoxin domain profile. 1 115 IPR013766 -
Lan3g0461 123 Pfam Thioredoxin 11 109 IPR013766 -
Lan3g0461 123 PANTHER THIOREDOXIN H-TYPE-LIKE ISOFORM X1 3 119 - -
Lan3g0461 123 PRINTS Thioredoxin family signature 31 39 - -
Lan3g0461 123 PRINTS Thioredoxin family signature 39 48 - -
Lan3g0461 123 PRINTS Thioredoxin family signature 78 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0461 Lan-Chr3 4193688 4195022 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0461 K03671 - gmx:100499879 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0549 10 4541551 4543856 Lan3g0461 3 4193688 4195022 LSH