Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0456 ATGGCAATAGCAACGGCTATTTTTCTTTGCTTCCTCACGGTGGCGCATTTTACCGCCACCACCTTAACATGCACCGCTACAACGTTAGAAGAAATCGAAGCCTTAACAACGTTCAAGGCCAATCTCGACGACCCACTTGGCTTCTTGGACGGTTGGGATTCATCCACGCCATCAGCACCATGTGACTGGCATGGCATTCTTTGTTACAACGAACGAGTTCACCAACTCACCTTGACTCGTCTTCAACTCAGTGGTTCAATATCAAACTCGCTTTCAAAGTTAACTCAGCTTCGAAAACTTAGTCTCCATAACAATAACTTCACTGGTTCTATTCCTTCTTCTTTATCAAACTGCATTCTCTTACGTGCAATTTATCTTCATAATAATTCTCTCACCGGAAAGTTACCATTTTCTCTTCTTAATCTCACAAACCTTCAAGTTTTCAACGTTGCTCATAACTTTCTCACCGGAAAAGTCCCCGGAGAAGTTTCAAACTCGTTGACTTTCCTTGACCTCTCGTGGAACTCGTTCTCTTATGATATTCCAGGGAATTTTTCTTCAAAGTCTCAAATGAGGATCATGAACTTGTCGTATAATAGCTTCAATGGTGGAATACCCTTCACTATTGGAATGTTGCAAAAGCTTGAGTTTTTGTATCTAGACTCAAATTTTCTTCATGGGACTTTCCCTTCAGCACTTGTCAATTGCACCAACCTTGTGGTTTTCAGTGCTGTGGATAATTTCATTGGTGGGTTGGTTCCTTCTACAATAGGGTCAATGCCAAAGCTTAAAGTTGTGTCTTTGATGCAAAATCGTGTATCGGGTTTGGTACCTTTTTCATTGTTATGCAATGTGGGTAACAAATCTTCTTCTTTAAGCATTGTTGAGTTAGGCTTTAATGCTATCACGGGTGTTTCTAAGCCACCAAATAGTGAAAAATGTTTCACATTGTTGGAGGTTTTGGACCTTAAAGAGAATCACGTTCACAATACCTTGTTCCCTTCATGGTTGTTGACCAATGCAACTTCATTAAGGTCACTTGATCTCTCCGGAAACTCGTTTTCGGGTGTCTTGCCGGTTGAAATTGGGAATCTGGTTAATTTGGAGGAGCTTAGGTTGGGTAGTAATTCATTATCAGGAAAAGTCCCTAGTGAAATTGTGAAATGTGAGTTTTTACAGGTTCTTGATCTTCAAGGGAACAAGTTTTCTGGTCATGTTCCTTCTTTTTTCGGCGAATTAAGGAGCCTCAAGATTTTATCCCTTGGTGGAAATTTGTTTACTGGTTCTGTGCCAAAGAGTTATGGAACACTTTCATCACTAGAGGTGTTAGATTTAAGCAACAATAATCTGTCAGGGATTATGCCTCAGGAAATCATGAGATTAAGCAACATGAGTGCTTTGAATCTCAGTAATAACAAATTTTCTGGCCAAGTTTTATCTGATATTGGTATTGGGGACTTGACAAATTTGCAGGTTCTTAACTTGAGCCAATGTGGATTTTCAGGAAGAGTTCCAAGTAGTGTTGGAAGTTTAATGAAGCTAACAGTGTTGGATTTGAGCAAGCAAAACCTCTCTGGTGAGTTACCAATTGAGCTTTTCGGATTACCAAGCTTACAAGTTGTTGAACTTGAAGAGAATCATTTATCCGGTGCTGTTCCGGAAGGTTTCAGCAGCATAGTTAGCTTAAGGCATCTCAATCTCACATCCAATGCCTTTGTTGGTGAAATTCCAGCAACCTATGGATTTCTTCAGTCCTTGGTTGTTCTCTCTTTGTCACACAATAGTGTTTCTGGTAACATACCTTTGGAGATTGGTAATTGTTCTCAGCTTCAAGTGCTGGAGTTGGAGTCAAATCATTTGCATGGTACCATTCCAGGTGATATTTCTCATATCTCTAGCTTAAAGGAGCTTAATTTGGGAGATAATAGATTAAGTGGAGATATCCCAAGTGAAATTTCACAATGTTCTGCTTTGAATTTACTCTTGTTGAATGGTAATCATTTATCGGGTCACATACCACAATCATTGTCAAAACTATCAAACCTGGTTGAGTTGAATCTTTCTTCAAATCAATTGAATGGAGAAATTCCAGTTAATCTTTCTCAAGTTTCCGGTTTGAAGTATTTGAATTTGTCTAGGAATAATCTCGATGGTGAAATTCCAGACATGCTTGGTTCTAGATTCAATGACCCTTCTGTATATGCAATGAACCAGAGGTTATGTGGAAAACCTTTGAAAAGGGAATGTAAAAATGTGAGAAGGAAAAGAAGGAAAAGGCTCATAATATTTGTAGGTGTGGCATTAGCCGGAGTGTGCATTTTGGGGTTGTTTTGTTGTGCCTATATTTACAGTTTGTTAAGGTGGCGCAAGAAGCTTAGAGAAGGGGTAACTGGAGAGAAAAGAAGGAGTCCTAATAGTGCAAGCTCGGGAGCGGATAGAGGACGAGGGAGTAGTGAAAATGGAGGACCAAAACTAGTAATGTTCAATGGTAAGATAACTTATGCTGAGACAGTTGAAGCAACAAGACACTTTGATGAGGAAAATGTGTTGAGTAGAGGAAGATATGGTCTAGTGTTCAAAGCCTCTTATCTAGATGGCATGGTTCTCTCGATTCGTCGTTTACCTGAAGGATTCATCAATGAGGCCATTTTTCGCAAAGAAGCAGAATCACTGGGCAAAGTGAAGCATAGAAATTTGACTGTTCTTCGCGGCTATTATGCAGGACCACCAACCGATGTGAGGCTTTTGGTTTATGATTACATGCCTAATGGTAACTTAGGGACATTGCTTCAAGAGGCTTCTCAGCAAGACGGGCATGTCCTGAATTGGCCTATGCGGCATCTCATCGCATTAGGCATTGCTCGCGGCCTAGCCTTCTTGCACTCAGTGCCAATAGTCCATGGCGATGTGAAGCCGCAAAACGTGCTCTTCGACGCTGATTTTGAAGCCCATTTGTCCGAATTCGGGTTAGAGAGGCTAACAAATATTGCAAACCCAGCTGAAGCATCATCATCATCTACTCCTATTGGTTCATTAGGCTATGTGTCACCAGAAGCAGCATTGACCGGACAAGCTACAAAAGAAGCCGATGTATATAGCTTTGGAATTGTGCTATTGGAGATACTAACCGGAAGGAAGCCGGTTATGTTTACACAAGATGAAGATATAGTGAAATGGGTTAAGAAACAATTGCAAAGGGGACAAATCTCGGAGTTGTTGGAACCTGGGTTGCTAGAACTCGATCCGGAGTCATCAGAATGGGAAGAGTTCTTGTTGGGTATCAAAGTAGCTCTTCTTTGCACAGCACCTGATCCTCTTGATAGACCATCAATGACAGATATTGTTTTCATGCTTGAAGGTTGCAGGGTTGGACCTGAAATGCCATCATCAGCTGATCTTACAACATTGCCTTCTCCTGTTTGA 3423 0.4087 MAIATAIFLCFLTVAHFTATTLTCTATTLEEIEALTTFKANLDDPLGFLDGWDSSTPSAPCDWHGILCYNERVHQLTLTRLQLSGSISNSLSKLTQLRKLSLHNNNFTGSIPSSLSNCILLRAIYLHNNSLTGKLPFSLLNLTNLQVFNVAHNFLTGKVPGEVSNSLTFLDLSWNSFSYDIPGNFSSKSQMRIMNLSYNSFNGGIPFTIGMLQKLEFLYLDSNFLHGTFPSALVNCTNLVVFSAVDNFIGGLVPSTIGSMPKLKVVSLMQNRVSGLVPFSLLCNVGNKSSSLSIVELGFNAITGVSKPPNSEKCFTLLEVLDLKENHVHNTLFPSWLLTNATSLRSLDLSGNSFSGVLPVEIGNLVNLEELRLGSNSLSGKVPSEIVKCEFLQVLDLQGNKFSGHVPSFFGELRSLKILSLGGNLFTGSVPKSYGTLSSLEVLDLSNNNLSGIMPQEIMRLSNMSALNLSNNKFSGQVLSDIGIGDLTNLQVLNLSQCGFSGRVPSSVGSLMKLTVLDLSKQNLSGELPIELFGLPSLQVVELEENHLSGAVPEGFSSIVSLRHLNLTSNAFVGEIPATYGFLQSLVVLSLSHNSVSGNIPLEIGNCSQLQVLELESNHLHGTIPGDISHISSLKELNLGDNRLSGDIPSEISQCSALNLLLLNGNHLSGHIPQSLSKLSNLVELNLSSNQLNGEIPVNLSQVSGLKYLNLSRNNLDGEIPDMLGSRFNDPSVYAMNQRLCGKPLKRECKNVRRKRRKRLIIFVGVALAGVCILGLFCCAYIYSLLRWRKKLREGVTGEKRRSPNSASSGADRGRGSSENGGPKLVMFNGKITYAETVEATRHFDEENVLSRGRYGLVFKASYLDGMVLSIRRLPEGFINEAIFRKEAESLGKVKHRNLTVLRGYYAGPPTDVRLLVYDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLAFLHSVPIVHGDVKPQNVLFDADFEAHLSEFGLERLTNIANPAEASSSSTPIGSLGYVSPEAALTGQATKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGIKVALLCTAPDPLDRPSMTDIVFMLEGCRVGPEMPSSADLTTLPSPV* 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0456 1140 MobiDBLite consensus disorder prediction 801 815 - -
Lan3g0456 1140 SUPERFAMILY Protein kinase-like (PK-like) 824 1129 IPR011009 -
Lan3g0456 1140 MobiDBLite consensus disorder prediction 797 824 - -
Lan3g0456 1140 Pfam Leucine rich repeat 343 402 IPR001611 GO:0005515
Lan3g0456 1140 Pfam Leucine rich repeat 414 474 IPR001611 GO:0005515
Lan3g0456 1140 Pfam Leucine rich repeat 513 571 IPR001611 GO:0005515
Lan3g0456 1140 Pfam Leucine rich repeat 609 668 IPR001611 GO:0005515
Lan3g0456 1140 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Lan3g0456 1140 PRINTS Leucine-rich repeat signature 440 453 - -
Lan3g0456 1140 PRINTS Leucine-rich repeat signature 679 692 - -
Lan3g0456 1140 ProSiteProfiles Protein kinase domain profile. 844 1127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0456 1140 ProSiteProfiles Leucine-rich repeat profile. 439 460 IPR001611 GO:0005515
Lan3g0456 1140 Gene3D Transferase(Phosphotransferase) domain 1 921 1128 - -
Lan3g0456 1140 SUPERFAMILY L domain-like 486 737 - -
Lan3g0456 1140 ProSitePatterns Serine/Threonine protein kinases active-site signature. 965 977 IPR008271 GO:0004672|GO:0006468
Lan3g0456 1140 SMART LRR_typ_2 679 703 IPR003591 -
Lan3g0456 1140 SMART LRR_typ_2 142 166 IPR003591 -
Lan3g0456 1140 SMART LRR_typ_2 437 460 IPR003591 -
Lan3g0456 1140 SMART LRR_typ_2 365 389 IPR003591 -
Lan3g0456 1140 SMART LRR_typ_2 631 655 IPR003591 -
Lan3g0456 1140 SMART LRR_typ_2 94 118 IPR003591 -
Lan3g0456 1140 SMART LRR_typ_2 535 558 IPR003591 -
Lan3g0456 1140 SMART LRR_typ_2 487 511 IPR003591 -
Lan3g0456 1140 SMART LRR_typ_2 413 436 IPR003591 -
Lan3g0456 1140 SMART LRR_typ_2 342 364 IPR003591 -
Lan3g0456 1140 SMART LRR_typ_2 583 607 IPR003591 -
Lan3g0456 1140 SMART LRR_typ_2 212 236 IPR003591 -
Lan3g0456 1140 Gene3D Ribonuclease Inhibitor 282 483 IPR032675 -
Lan3g0456 1140 Gene3D Ribonuclease Inhibitor 484 752 IPR032675 -
Lan3g0456 1140 SMART serkin_6 844 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0456 1140 Gene3D Ribonuclease Inhibitor 184 281 IPR032675 -
Lan3g0456 1140 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1133 - -
Lan3g0456 1140 Gene3D Ribonuclease Inhibitor 30 183 IPR032675 -
Lan3g0456 1140 Gene3D Phosphorylase Kinase; domain 1 817 920 - -
Lan3g0456 1140 Pfam Protein kinase domain 846 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0456 1140 SUPERFAMILY L domain-like 28 329 - -
Lan3g0456 1140 SUPERFAMILY L domain-like 286 546 - -
Lan3g0456 1140 PANTHER LRR RECEPTOR-LIKE KINASE 4 1133 - -
Lan3g0456 1140 ProSiteProfiles Leucine-rich repeat profile. 633 655 IPR001611 GO:0005515
Lan3g0456 1140 Pfam Leucine Rich Repeat 489 511 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0456 Lan-Chr3 4121063 4124762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0456 1 1140 Receptor kinase-like Gene Family AT4G36180 60.174 0.0 1297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Lan3g0456 PK_Tyr_Ser-Thr 1.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0456 - - jre:108991311 1592.02