Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0450 ATGTCATCAACAAAATGCAGCACAATCGGCCACATTGTACGGCTCCGCCAGATGCTCCGCCGATGGCGAAACAAGGCACACATTTCATCCGCCAATCGCTCACCGTCAGATGTTCCCACAGGACACGTGGCACTCTGTGTTGGAATCAACTGCACCAGATTTGTTGTACCCGTAACGTACCTGAACCACCCCATCTTCAAGAAGCTTCTAGTAGAAGTGGAGGAAGAGTACGGTTTCTCTAACCATGGACCCTTGGCTATTCCCTGCGACGAAGATGTGTTTCAACAGATTCTCCGGTTTATTTCCCGGTCTAAACCGGGAAAGAAATCGAACCGGTTGGTTAATATGGAGATTGAGGATTTTCAAAGGTATTGCAACTTGGGTCTTAGGAGTAATCTTGATTTCTGGCCAGAAACTCGACCGCTACTCCCTGGCTTTACTGATAAAACTATTTGGTAG 459 0.4749 MSSTKCSTIGHIVRLRQMLRRWRNKAHISSANRSPSDVPTGHVALCVGINCTRFVVPVTYLNHPIFKKLLVEVEEEYGFSNHGPLAIPCDEDVFQQILRFISRSKPGKKSNRLVNMEIEDFQRYCNLGLRSNLDFWPETRPLLPGFTDKTIW* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0450 152 PANTHER SMALL AUXIN-UP RNA-RELATED 6 145 - -
Lan3g0450 152 Pfam Auxin responsive protein 14 100 IPR003676 GO:0009733
Lan3g0450 152 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 145 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0450 Lan-Chr3 4030977 4032203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0450 5 151 Calmodulin-binding Proteins AT4G34750 50.000 3.67e-47 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0450 K14488 - gmx:100782525 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0533 10 4321137 4322014 Lan3g0450 3 4030977 4032203 LSH