Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0424 ATGTCATCATCAACCCCTCAAGTTATAACATGCAAAGCTGCAGTTGCATGGGGAGCTGGAGAGGCATTGGTAATGGAAGAAGTTCAAGTTAGTCCTCCACAACCAATGGAGATTCGGATTAAGGTTGTCTCTACCTCTCTCTGTCGCAGTGATCTTGTTGCTTGGGAAACTCATGCCATATTCCCTCGCATATTTGGCCATGAAGCATCAGGGATTGTAGAGAGTGTGGGGCTGGGAGTAACTGAATTCAAAGAGGGGGATCATGTGCTAACAGTATACATTGGAGAGTGCATGGAATGCAGGCTTTGCACATCAGGAAAAACTAACATTTGCCATGTTTTGGGATTGGAAAGAAAAGGTCTAATGCATAGTGATCAAACGACTCGCTTCTCTGTAAAAGGGAAGCCGGTTTATCATTATTGCGCTGTTTCAAGTTTCAGTCAATATACAGTTGTCCATTCGGGATGTGCAGTGAAAGTCGACCCACATGTGCCTCTTGAGAAAATATGCCTTTTGAGCTGTGGAGTTGCTGCAGGTCTTGGTGCAGCATGGAATGTTGCAGATGTGTCAAAAGGATCAACAGTAGTGATATTTGGCCTCGGAACTGTCGGCCTTTCTGTTGCACAAGGTGCCAGACTAAGGGGTGCATCCAGAATAATTGGTGTGGACAACAATCCACAGAAGTTTGACAAAGCTAAAGCTTTTGGGATTACAGAAGTTGTTGACCCGAATTCCTATAAAGAACCTATTGCTCAGGTTATTAAGCGCATCACTGATGGTGGAGCAGATTTCTCTTTTGAATGTGCAGGTGACACTGATATGATAACCACTGCATTGCAGTCATGCTGCGATGGATGGGGTTTAACTGTTACACTTGGTGTGCCAAAGGTAAAGCCTGAGATGTCAGCTCATTATGCCCTACTCCTAATGGGAAGAACATTGAAAGGATCTCTATTTGGAGGATGGAAACCAAAATCTGATCTTCCTTCATTAGTAGAGAAGTATGTGAAAAAGGAAATTGATATTGATGGCTACATAACACACAATTTGCCATTTGATGACATTAACAAGGCTTTCAATCTCATGAAGGAAGGAAAGTGTCTACGTTGTGTTATCCATATGCCTTTACAATGA 1134 0.4295 MSSSTPQVITCKAAVAWGAGEALVMEEVQVSPPQPMEIRIKVVSTSLCRSDLVAWETHAIFPRIFGHEASGIVESVGLGVTEFKEGDHVLTVYIGECMECRLCTSGKTNICHVLGLERKGLMHSDQTTRFSVKGKPVYHYCAVSSFSQYTVVHSGCAVKVDPHVPLEKICLLSCGVAAGLGAAWNVADVSKGSTVVIFGLGTVGLSVAQGARLRGASRIIGVDNNPQKFDKAKAFGITEVVDPNSYKEPIAQVIKRITDGGADFSFECAGDTDMITTALQSCCDGWGLTVTLGVPKVKPEMSAHYALLLMGRTLKGSLFGGWKPKSDLPSLVEKYVKKEIDIDGYITHNLPFDDINKAFNLMKEGKCLRCVIHMPLQ* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0424 377 Pfam Zinc-binding dehydrogenase 203 327 IPR013149 -
Lan3g0424 377 Gene3D - 14 369 - -
Lan3g0424 377 SUPERFAMILY GroES-like 327 373 IPR011032 -
Lan3g0424 377 CDD alcohol_DH_plants 9 373 - -
Lan3g0424 377 PANTHER ALCOHOL DEHYDROGENASE-LIKE 6 5 374 - -
Lan3g0424 377 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 66 80 IPR002328 GO:0008270|GO:0016491
Lan3g0424 377 PANTHER ALCOHOL DEHYDROGENASE 5 374 - -
Lan3g0424 377 SUPERFAMILY GroES-like 5 184 IPR011032 -
Lan3g0424 377 Gene3D - 179 317 - -
Lan3g0424 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 337 IPR036291 -
Lan3g0424 377 Pfam Alcohol dehydrogenase GroES-like domain 36 155 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0424 Lan-Chr3 3637324 3641783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0424 37 175 Monolignol Biosynthesis Gene Families AT1G72680 27.083 1.07e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0424 K00001 - gmx:100819938 693.345