Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0410 ATGGAAGGTTCCTCAGGTGTGAAAAAAGGTGCATGGAGTAAGGTAGAAGATGAACTTCTCAGGACGTGTGTGCAACAATATGGGGAAGTAAAATGGAACCTTGTTCCTGAACAAGCAGGTTTGAACAGATGCAGTAAAAGTTGTAGACTGCGGTGGTTGAATTATTTGAAACCAAATATCAACCGGGGAAAGTTCACTGAAGACGAAGTTGATTTGATGATACGATTACATAAACTTTTAGGAAATAGATGGTCTCTCATTGCTGGAAGACTTCCAGGAAGAACTGCTAATGATGTGAAAAACTATTGGAATACTCATATTCGTAAGAAGACGTCTTCTCAAAATGAAGATATTAGTGCAAGACCAATGGACATAGTGATGGAACCTCATGTTATAATAAAGCCTCAACCTAGGAAAATTTCAACAAAAATGCCCTTCTTGATGTATAGTGAAAATCAATGTGGGGACAATGAGTTTATTACCAATCAAGCATGTCTAGCAACTGAGTTTTACGAAGAAAATGACACATGCTTGTTGGGTGAGCAAGATTTGATGCTTCTGAAAGACATTAATTGGGATGAGGATCTTTATTCATTGACAACAAAATTTGACGATTTTGTTGGGGTAGATGAATGTTGGAATGATGTTCCTTTTCATTTCAATTTATGA 669 0.3692 MEGSSGVKKGAWSKVEDELLRTCVQQYGEVKWNLVPEQAGLNRCSKSCRLRWLNYLKPNINRGKFTEDEVDLMIRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHIRKKTSSQNEDISARPMDIVMEPHVIIKPQPRKISTKMPFLMYSENQCGDNEFITNQACLATEFYEENDTCLLGEQDLMLLKDINWDEDLYSLTTKFDDFVGVDECWNDVPFHFNL* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0410 222 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Lan3g0410 222 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Lan3g0410 222 Gene3D - 3 61 - -
Lan3g0410 222 CDD SANT 64 107 IPR001005 -
Lan3g0410 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 56 IPR017930 -
Lan3g0410 222 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 153 - -
Lan3g0410 222 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Lan3g0410 222 CDD SANT 11 56 IPR001005 -
Lan3g0410 222 Gene3D - 63 124 - -
Lan3g0410 222 SMART sant 61 109 IPR001005 -
Lan3g0410 222 SMART sant 8 58 IPR001005 -
Lan3g0410 222 PANTHER TRANSCRIPTION FACTOR MYB113-RELATED 6 153 - -
Lan3g0410 222 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Lan3g0410 222 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
Lan3g0410 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0410 Lan-Chr3 3499850 3502246 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0410 2 143 MYB Transcription Factor Family AT1G66370 60.403 4.88e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan3g0410 Myb_DNA-binding 2.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0410 - K16166 lang:109335100 263.462