Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0407 ATGGATGGATCCTTAGGTGTGAGAAAAGGTGCATGGAGTAAGGTAGAAGATGAACTTCTTAGATCTTGTGTGGAACAATATGGGGAAGGAAAATGGCACCTTGTGCCTAAACGAGCAGGCTTGAACAGATGCCGCAAAAGTTGTAGACTGAGATGGTTAAATTATCTAAAACCAAATATCAACCGAGGAGAGTTCACTGAGGAGGAAGTTGACTTGATGATAAGATTGCATAAACTTTTGGGAAATAGATGGTCTCTCATTGCTGGAAGACTTCCTGGAAGAACTTCTAACGATGTGAAAAACTATTGGAATACTTATATTCGGAAGAAGCTCCCCTCTCAAAGGGAAGATATTAATGAAAGACCAAAGGAAATAGTAAGGGAACCTTCTTCTGTGATAAAGCCTCAACCTTGGAACATTTCAACAAAAATGCCCTTCTTAAGGGATAAAGAAGATCATAGTGAGGACAAAGAGTGCATTACCAATCAAGGATGTCTTGCAACTGCATCAGAATGCAATAAAGAAAATGACACAAGCTGGTTTGATGTGCAAGATTGGACGCTCCTGAAAGATTTTAATTGGGATGCAAACCTTAATTCATTGACAACAAATGTTGAACAATTTGTTGTAGAAGATCAAAGTTGGAGTGATGTTCCTTTTAATATCAACTTGTGGGATACATAA 684 0.383 MDGSLGVRKGAWSKVEDELLRSCVEQYGEGKWHLVPKRAGLNRCRKSCRLRWLNYLKPNINRGEFTEEEVDLMIRLHKLLGNRWSLIAGRLPGRTSNDVKNYWNTYIRKKLPSQREDINERPKEIVREPSSVIKPQPWNISTKMPFLRDKEDHSEDKECITNQGCLATASECNKENDTSWFDVQDWTLLKDFNWDANLNSLTTNVEQFVVEDQSWSDVPFNINLWDT* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0407 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Lan3g0407 227 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 178 - -
Lan3g0407 227 CDD SANT 64 107 IPR001005 -
Lan3g0407 227 SMART sant 61 109 IPR001005 -
Lan3g0407 227 SMART sant 8 58 IPR001005 -
Lan3g0407 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 56 IPR017930 -
Lan3g0407 227 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Lan3g0407 227 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Lan3g0407 227 CDD SANT 11 56 IPR001005 -
Lan3g0407 227 Gene3D - 63 129 - -
Lan3g0407 227 Gene3D - 9 61 - -
Lan3g0407 227 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
Lan3g0407 227 PANTHER TRANSCRIPTION FACTOR MYB113-RELATED 6 178 - -
Lan3g0407 227 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Lan3g0407 227 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0407 Lan-Chr3 3470327 3473248 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0407 6 143 MYB Transcription Factor Family AT1G66370 61.806 7.79e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan3g0407 Myb_DNA-binding 1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0407 - K09422 lang:109335100 287.73