Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0395 ATGGTGAGGAAGAGGAGAACTGAAGCACCTTCTGGGGGTGAAAGCTCCGAGTCTCAACAACGTCCTGCTGCAGAAAGGAGTGCCCCACCCCCTCAACAATATGCCCCACCAGCTGGAGGGGCAGGTGGACCCCAAGGAGGACGTGGGGGTTATGCATCTCAAGGAGGACGTGGAAGTGGTTATGGTGGTAACGGGCGTGGTCGTGGAATGCCCCAACAACAATATGGTGGTCCCCCTGACTATCAACAAGGTAGAGGAAGGGGAGGGCCTCCTCAGCAAGGAGGCCGTGGTCGTGGTGAATATGGTGGTGGTGGATATGGTGGTGGTGGCCGTGGTGGTGGTATGGGAATTGGCCGTGGCACAGGACCTGGACCTTCATATGGTGGCCCATCCAGGCCACCTTACCCCGAGCTGCACCAAGCAACCCCAGTGCCATACCAAGCTGGGGTAACTCCTCAGCCTACACCAGCTGAGGTCGGATCTTCTTCGCAGGCACCTGAACAATTACCAGTGGAACAACAAATGGAGCAGTTGTCCGTTCAATCAGAAGTGTCTGATGTTCCTGCTCCAGCCCCTGTTGGTCCACCTGCCAGCAAATCATCTATTAGGTTTCCCCTTCGTCCTGGAAAGGGTACCTATGGCCATAAATGTATTGTCAAGGCCAATCACTTCTTTGCCGAGCTGCCTAATAAAGATTTGCATCAATATGATGTCACAATTATTCCCGAAGTAACTTCAAGAGGTGTGAACAGAGCTGTGATGGAGCAACTCGTGAAGCTGTATCGTGAATCTCATCTAGGAAAGAGACTCCCTGCTTATGATGGCCGCAAGAGCCTGTATACTGCTGGTCCACTTCCTTTTGTGTCAAAGGAGTTTCGAGTCTCTCTTATTGATGAAGATGACGGAACAGGAGCACAGAGGAGAGAAAGGGAGTTCAGGGTTGTGATAAAAATGGCTGCACGGGCAGACCTTCATCATTTAGGTCTCTTTCTGCAAGGGAAGCAAACTGATGCCCCTCAGGAAGCTCTGCAAGTCCTTGACATTGTCCTGCGTGAACTCCCGACTACCAGGTATTGTCCTGTAGGAAGATCATTTTATTCCCCTGATCTTGGTAGAAGGCAGTCATTAGGTGAGGGTTTGGAAAGTTGGCGTGGTTTCTATCAAAGTATCCGCCCCACTCAGATGGGACTGTCTCTGAACATTGATATGTCCTCCACTGCATTTATTGAGCCGTTGCCAGTAATTGACTTCGTAACTCAACTGCTGAACAGGGATCTCACTCAACGACCACTGTCTGACTCTGATCGTGTGAAGATCAAAAAAGCACTCAGGGGTATAAAAGTTGAAGTAACACATCGTGGAAACATGAGAAGAAAATACCGTATCTCTGGCCTTACTTCACAGGCTACAAGAGAGTTGACATTCCCTGTGGATGAAAGGGGAACGATGAAATCTGTTGTGGAGTATTTCTTTGAGACTTATGGTTTTATCATAAAACATCCCCAATGGCCTTGTTTGCAAGTAGGCAATACACAGAGACCAAACTATTTGCCAATGGAGGTTTGCAAGATTGTAGAAGGTCAAAGGTACTCGAAGAGGTTGAATGAGAGGCAGATTACTGCTTTGCTAAAAGTCACATGCCAGCGTCCTGTTGAGAGGGAGCGTGATATTATGCAGACTGTATATCACAATGCCTACCATGAGGACCCATATGCCAAAGAGTTTGGAATTAAAATTAGTGAAAAACTTGCTCAGGTTGAAGCCCGCATTCTCCCTCCTCCTCGGCTCAAATATCATGATACAGGCAGAGAAAAAGATTGCTTGCCTCAGGTTGGCCAATGGAATATGATGAATAAGAAAATGGTCAATGGGGGAACAGTCAATCACTGGTTCTGCATAAATTTTGCATGGAATGTTCAAGATAGTGTTGCCCGGGGCTTTTGTTTTGAACTTGCCCAGATGTGTCAGATATCTGGCATGGCATTCAATCTAGATCCAGTAGTTCCCGCACTCAGTGCTCGCCCTGACCAAGTGGAGAAGGTTCTGAAAAATAGGCATTCTGATGCTAAGAACAGACTGCAGGGACAGGATCTTGATCTGCTCATTGTTATTTTGCCTGATAATAATGGCTCTCTTTATGGTGACCTCAAACGTATATGTGAGACAGATCTTGGGGTTGTTTCCCAATGCTGTTTAACGAAGCACGTATTTAAAATGAACAAGCAGTACCTTGCAAATGTTGCTTTGAAAATTAATGTAAAGGTTGGAGGAAGGAACACCGTGCTTGTTGATGCGCTTTCACGACGCATTCCCTTGGTTAGTGACAGGCCCACAATTATTTTTGGAGCTGATGTGACTCATCCACATCCTGGAGAGGATTCCAGTCCTTCTATTGCAGCTGTTGTTGCTTCTCAAGATTGGCCTGAAGTTACCAAGTATGCTGGTCTGGTTTGTGCCCAAGCTCATAGGCAAGAGCTTATCCAGGACCTATATAAGCAGTGGCAAGATCCTGTCAGAGGGACTGTAACTGGAGGAATGATCAAGGAACTCCTCATATCTTTCCGGAGGGCTACTGGGCAGAAGCCAACCCGAATCATATTTTACAGGGATGGTGTTAGCGAGGGTCAGTTTTACCAAGTTTTATTGTTTGAGCTTGATGCTATTCGAAAGGCTTGTGCATCCCTTGAGCCTAACTATCAGCCACCTGTGACCTTTGTGGTGGTTCAGAAGCGCCATCATACAAGGCTCTTCGCAAACAACCATAATGACAGGGGTTCTATAGATAGGAGTGGGAATATATTACCTGGAACCGTGGTAGACTCCAAAATCTGTCATCCCACGGAATTTGACTTCTATCTCTGCAGTCATGCGGGACTACAGGGTACCAGCCGGCCTGCTCATTACCATGTTCTGTGGGACGAGAACAATTTTTCTGCTGATGGTTTGCAGACTCTGACCAACAATCTGTGCTACACTTATGCAAGGTGTACACGGTCTGTTTCAATTGTGCCTCCTGCCTATTATGCTCACCTTGCTGCATTTCGAGCTCGGTTCTACATGGAACCCGAGACTTCCGACAGTGGGTCAATGGCAAGCGGTGCTTATGCTGCAAATCGTGGAATGGCTGGGAGTGCCACTCGTAGCACTCGGGCACCTGGTCTCAATGCTGCTGTGAGGCCTCTTCCTGCTTTGAGGGATAATGTGAAGAAGGTCATGTTTTACTGCTAA 3228 0.4765 MVRKRRTEAPSGGESSESQQRPAAERSAPPPQQYAPPAGGAGGPQGGRGGYASQGGRGSGYGGNGRGRGMPQQQYGGPPDYQQGRGRGGPPQQGGRGRGEYGGGGYGGGGRGGGMGIGRGTGPGPSYGGPSRPPYPELHQATPVPYQAGVTPQPTPAEVGSSSQAPEQLPVEQQMEQLSVQSEVSDVPAPAPVGPPASKSSIRFPLRPGKGTYGHKCIVKANHFFAELPNKDLHQYDVTIIPEVTSRGVNRAVMEQLVKLYRESHLGKRLPAYDGRKSLYTAGPLPFVSKEFRVSLIDEDDGTGAQRREREFRVVIKMAARADLHHLGLFLQGKQTDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDLGRRQSLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDLTQRPLSDSDRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFFETYGFIIKHPQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPVERERDIMQTVYHNAYHEDPYAKEFGIKISEKLAQVEARILPPPRLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNHWFCINFAWNVQDSVARGFCFELAQMCQISGMAFNLDPVVPALSARPDQVEKVLKNRHSDAKNRLQGQDLDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVFKMNKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKQWQDPVRGTVTGGMIKELLISFRRATGQKPTRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDRGSIDRSGNILPGTVVDSKICHPTEFDFYLCSHAGLQGTSRPAHYHVLWDENNFSADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAYAANRGMAGSATRSTRAPGLNAAVRPLPALRDNVKKVMFYC* 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0395 1075 CDD Piwi_ago-like 570 1020 IPR045246 -
Lan3g0395 1075 Pfam Mid domain of argonaute 609 684 IPR032473 -
Lan3g0395 1075 Gene3D paz domain 405 530 - -
Lan3g0395 1075 SMART Piwi_a_2 700 1021 IPR003165 GO:0003676
Lan3g0395 1075 Pfam PAZ domain 418 541 IPR003100 GO:0005515
Lan3g0395 1075 Gene3D - 769 1075 IPR036397 GO:0003676
Lan3g0395 1075 MobiDBLite consensus disorder prediction 154 184 - -
Lan3g0395 1075 Pfam Argonaute linker 2 domain 552 598 IPR032472 -
Lan3g0395 1075 MobiDBLite consensus disorder prediction 12 26 - -
Lan3g0395 1075 MobiDBLite consensus disorder prediction 1 205 - -
Lan3g0395 1075 Pfam N-terminal domain of argonaute 216 350 IPR032474 -
Lan3g0395 1075 Gene3D - 590 763 - -
Lan3g0395 1075 Pfam Piwi domain 701 1020 IPR003165 GO:0003676
Lan3g0395 1075 CDD PAZ_argonaute_like 411 525 - -
Lan3g0395 1075 SUPERFAMILY PAZ domain 218 563 IPR036085 GO:0005515
Lan3g0395 1075 SMART PAZ_2_a_3 416 548 IPR003100 GO:0005515
Lan3g0395 1075 ProSiteProfiles Piwi domain profile. 700 1021 IPR003165 GO:0003676
Lan3g0395 1075 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 100 1074 - -
Lan3g0395 1075 Pfam Glycine-rich region of argonaut 76 185 IPR024357 -
Lan3g0395 1075 SUPERFAMILY Ribonuclease H-like 689 1021 IPR012337 -
Lan3g0395 1075 SMART DUF1785_2 359 411 IPR014811 -
Lan3g0395 1075 ProSiteProfiles PAZ domain profile. 412 526 IPR003100 GO:0005515
Lan3g0395 1075 PANTHER PROTEIN ARGONAUTE 1A 100 1074 - -
Lan3g0395 1075 Pfam Argonaute linker 1 domain 360 410 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0395 Lan-Chr3 3016369 3023875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0395 83 1075 Eukaryotic Initiation Factors Gene Family AT1G48410 79.016 0.0 1590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0395 K11593 - gmx:100780375 1713.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0480 10 3682477 3690352 Lan3g0395 3 3016369 3023875 LSH