Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0394 ATGTCACCAGTAGGATTACCACCTGGTTTTAGGTTTCATCCAACTGATGAAGAGCTTGTGAATTATTACCTCAAGAGGAAGATCAATGGCCTAGAAATTGAACTTGATATCATTCCTGAGGTTGATCTCTACAAATGTGAACCATGGGAATTGGCAGAGAAATCATTCTTACCAAGTAGAGACCCAGAGTGGTACTTCTTTGGACCTAGGGACAGGAAATACCCCAATGGGTTCAGAACAAATAGAGCAACTAGAGCTGGGTATTGGAAATCAACAGGGAAAGATAGGAAAGTTTCATACCAAAACAGACCTATTGGTATGAAGAAGACATTGGTGTACTATAGAGGTAGAGCTCCTCAAGGTATGAGAACTGATTGGGTTATGCATGAGTATCGCCTCGATGATAAAGATTGTGAAGATACCTCTGGATTACAGGATACATATGCATTGTGCCGTGTGTTCAAGAAAAATGGAATTTGCACTGATATTGAAGAACAAGGTCAATGTAGTATGTCATCACTAATTGAGAGCTCTCAAACCATAATTAATGAGTGTGAGACCATGTCTCCAGACATATTAGGAGCATCATATTCATGCTTAGAAGAGGAAGACAAAGATGATTCATGGATGCAGTTCATTACAGAAGATGCATGGTATTCTTCTAATGCAGCAATGGTTGGTGGTGGTGAAGAAGTTTCACATGTTACATTTACAAACTAA 720 0.3931 MSPVGLPPGFRFHPTDEELVNYYLKRKINGLEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRKVSYQNRPIGMKKTLVYYRGRAPQGMRTDWVMHEYRLDDKDCEDTSGLQDTYALCRVFKKNGICTDIEEQGQCSMSSLIESSQTIINECETMSPDILGASYSCLEEEDKDDSWMQFITEDAWYSSNAAMVGGGEEVSHVTFTN* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0394 239 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 239 - -
Lan3g0394 239 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 239 - -
Lan3g0394 239 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Lan3g0394 239 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Lan3g0394 239 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Lan3g0394 239 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0394 Lan-Chr3 2980133 2984031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0394 1 232 NAC Transcription Factor Family AT3G17730 73.984 1.59e-131 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan3g0394 NAM 3.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0394 - - gmx:100784495 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0479 10 3664621 3668485 Lan3g0394 3 2980133 2984031 LSH