Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0393 ATGGCTGTTATTGCTAACGTTGTTGGTGTTAATGTTGTTCTATCTGCTCTACCCATAACAAATGATTTCACTTTCAACCATAATAACATCCAAAGTCATAGACTTTATCTGAATTGTTCCAAACCCAGCCAAATAATAAGCTCATTCCCTTTCTCCTTATCATTACCACTCACAAAAAAAGGTAGTTGCTTTCTGTTGCCATGTCTCCCTTCTGATTCTGAATCCTTGAACTCATCTTCCATTACAAGAAAAGTTTATGCTGTTCCTTCACTTAAGCTCTTTGTTAGTGGGCTATCTTTTCGTACCACTGAAGAGAGCTTGCGAAATGCATTCGAGAATTTTGGTCAACTTGTAGAAGTGAATCTGGTTATGGATAAAATTGCAAATAGACCAAGAGGCTTTGCCTTTCTTCGTTATGCTACTGAAGATGAATCTCATAAGGCTATTGAGGGAATGCATGGAAAGTTCTTGGATGGTAGAGTCATATTTGTGGAAGTAGCCAAACCAAGATCAGAGCTACGGCAAGAAAAAACTAGACCAAAATTCTAG 549 0.3789 MAVIANVVGVNVVLSALPITNDFTFNHNNIQSHRLYLNCSKPSQIISSFPFSLSLPLTKKGSCFLLPCLPSDSESLNSSSITRKVYAVPSLKLFVSGLSFRTTEESLRNAFENFGQLVEVNLVMDKIANRPRGFAFLRYATEDESHKAIEGMHGKFLDGRVIFVEVAKPRSELRQEKTRPKF* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0393 182 Gene3D - 70 181 IPR012677 -
Lan3g0393 182 SMART rrm1_1 92 165 IPR000504 GO:0003723
Lan3g0393 182 PANTHER TRANSFORMER-2-RELATED 24 178 - -
Lan3g0393 182 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 91 169 IPR000504 GO:0003723
Lan3g0393 182 PANTHER RNA-BINDING PROTEIN 1 24 178 - -
Lan3g0393 182 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 93 162 IPR000504 GO:0003723
Lan3g0393 182 SUPERFAMILY RNA-binding domain, RBD 84 175 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0393 Lan-Chr3 2975412 2978070 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0393 93 150 C2H2 Transcription Factor Family AT2G19380 36.207 4.33e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0393 - - lang:109343093 319.701