Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan3g0393 | ATGGCTGTTATTGCTAACGTTGTTGGTGTTAATGTTGTTCTATCTGCTCTACCCATAACAAATGATTTCACTTTCAACCATAATAACATCCAAAGTCATAGACTTTATCTGAATTGTTCCAAACCCAGCCAAATAATAAGCTCATTCCCTTTCTCCTTATCATTACCACTCACAAAAAAAGGTAGTTGCTTTCTGTTGCCATGTCTCCCTTCTGATTCTGAATCCTTGAACTCATCTTCCATTACAAGAAAAGTTTATGCTGTTCCTTCACTTAAGCTCTTTGTTAGTGGGCTATCTTTTCGTACCACTGAAGAGAGCTTGCGAAATGCATTCGAGAATTTTGGTCAACTTGTAGAAGTGAATCTGGTTATGGATAAAATTGCAAATAGACCAAGAGGCTTTGCCTTTCTTCGTTATGCTACTGAAGATGAATCTCATAAGGCTATTGAGGGAATGCATGGAAAGTTCTTGGATGGTAGAGTCATATTTGTGGAAGTAGCCAAACCAAGATCAGAGCTACGGCAAGAAAAAACTAGACCAAAATTCTAG | 549 | 0.3789 | MAVIANVVGVNVVLSALPITNDFTFNHNNIQSHRLYLNCSKPSQIISSFPFSLSLPLTKKGSCFLLPCLPSDSESLNSSSITRKVYAVPSLKLFVSGLSFRTTEESLRNAFENFGQLVEVNLVMDKIANRPRGFAFLRYATEDESHKAIEGMHGKFLDGRVIFVEVAKPRSELRQEKTRPKF* | 183 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan3g0393 | 182 | Gene3D | - | 70 | 181 | IPR012677 | - | |
Lan3g0393 | 182 | SMART | rrm1_1 | 92 | 165 | IPR000504 | GO:0003723 | |
Lan3g0393 | 182 | PANTHER | TRANSFORMER-2-RELATED | 24 | 178 | - | - | |
Lan3g0393 | 182 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 91 | 169 | IPR000504 | GO:0003723 | |
Lan3g0393 | 182 | PANTHER | RNA-BINDING PROTEIN 1 | 24 | 178 | - | - | |
Lan3g0393 | 182 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 93 | 162 | IPR000504 | GO:0003723 | |
Lan3g0393 | 182 | SUPERFAMILY | RNA-binding domain, RBD | 84 | 175 | IPR035979 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan3g0393 | Lan-Chr3 | 2975412 | 2978070 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan3g0393 | 93 | 150 | C2H2 Transcription Factor Family | AT2G19380 | 36.207 | 4.33e-09 | 53.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan3g0393 | - | - | lang:109343093 | 319.701 |