Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0392 ATGGAGATGCAGGACTCAATCAAAGGCTCAAGGTCAAACAATTCTCGATCAGGTTGTAACAGCCATTCTACTGGTGGAACACAATCTGAGAATGTTGTTCAATCGTGGGATGTAACTTCTGCTGTAAACAACCACACCCCCAAGGTTAGGAAACCGTATACCATTTCTAAGCAAAGGGAGAAGTGGACAGAGGAAGAGCATCAGAAGTTCCTTGAAGCATTGAAATTGTATGGTCGTGGCTGGCGTCAAATTGAAGAGCATATAGGTACCAAAACTGCTGTTCAGATTCGAAGTCATGCTCAGAAATTTTTCTCTAAGATTGTGCGGGAATCTGATAGCAGTGCTGAAACTTCAATACAGCCAATTGACATACCTCCTCCTCGTCCGAAGAGGAAACCCCTTCATCCATATCCCCGTAAATCAATTGGATCTTCGAAAGGACATTCCATACCAAGTGAATCAGGAATATCTCCATCTTCAAACCTGTTAGTTGCAGAGAAAGACACCCATACTCCGACCTCTATGCTATCTGCCTTTACTTCGGAGGCATTTGGGCAATCATTTTCAGAGCAAACCAACAGATGTGTTTCACCGAATTCTTGCACCACTGATATTCACTCACTCAGCTTGTCACCTGTTGAAAAGGACAATGAGTGCATGACATCCGATTCATCCGAGGAGGACAAGAAAGGATCTCCACCTTCAGTTCCTCTATCCACCAGTTCAAAGCTACTCTTGCCCGTGAAATCTGAGTTGAGCTCCAAGGAAACTGAATGCTTCAATGAAGAAGCTGCGAAAATGCCACATGTTACTTGTATTAAACTTTTTGGAAGAACTGTTTCTATGGTAAGCAACCAGAAGTCACTGAATGTAGATGAGGAAAGTAATAAGCCAATTACTACTAAGTCTGATGAAGTGGATAATGTTGAGTATCAAAAACTTGGCCAAGCATGGTCATTGGAGCAAGTAGATATACAATTATCACTGGGATTGTGTAATAGTAATTGTCATACAACTCCTGATGGAGGTAAAGTAGAATGCATTGAAGCCCCAAAGGAGGATCTATGTTCTGGTGAATCTGCACTTGATGATTCTTTGCCATGTACTCAAATCACGAGTTCCGTGCCTCTTTGTCCCTCTTTGAAAGCAACAACAGGAGGAGAGGAAGGAAGTTCTTGCACTGGTTCTAATGCTGAATCAGTTAGTGGTATGGAGAATCAAGGCAAGAACTCAGATGCTGTTGATTCTCAATATAAAAAATCTCATCACAAGGAAGGAAAAGTATCCCAAAGGGGTTTTGTACCATACAAAAGATGCTTAGCTGAAAGAGATGCAAATTCTTTAATTGCCTCTTTGGAAGAGAGGGAAGGGCAACGACCTCGTGTGTGCTCATAG 1395 0.4215 MEMQDSIKGSRSNNSRSGCNSHSTGGTQSENVVQSWDVTSAVNNHTPKVRKPYTISKQREKWTEEEHQKFLEALKLYGRGWRQIEEHIGTKTAVQIRSHAQKFFSKIVRESDSSAETSIQPIDIPPPRPKRKPLHPYPRKSIGSSKGHSIPSESGISPSSNLLVAEKDTHTPTSMLSAFTSEAFGQSFSEQTNRCVSPNSCTTDIHSLSLSPVEKDNECMTSDSSEEDKKGSPPSVPLSTSSKLLLPVKSELSSKETECFNEEAAKMPHVTCIKLFGRTVSMVSNQKSLNVDEESNKPITTKSDEVDNVEYQKLGQAWSLEQVDIQLSLGLCNSNCHTTPDGGKVECIEAPKEDLCSGESALDDSLPCTQITSSVPLCPSLKATTGGEEGSSCTGSNAESVSGMENQGKNSDAVDSQYKKSHHKEGKVSQRGFVPYKRCLAERDANSLIASLEEREGQRPRVCS* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0392 464 SMART sant 58 106 IPR001005 -
Lan3g0392 464 PANTHER SWI/SNF COMPLEX-RELATED 3 452 - -
Lan3g0392 464 MobiDBLite consensus disorder prediction 145 159 - -
Lan3g0392 464 CDD SANT 61 104 IPR001005 -
Lan3g0392 464 Pfam Myb-like DNA-binding domain 59 102 IPR001005 -
Lan3g0392 464 Gene3D - 61 108 - -
Lan3g0392 464 MobiDBLite consensus disorder prediction 415 429 - -
Lan3g0392 464 MobiDBLite consensus disorder prediction 384 429 - -
Lan3g0392 464 ProSiteProfiles SANT domain profile. 57 108 IPR017884 -
Lan3g0392 464 MobiDBLite consensus disorder prediction 384 414 - -
Lan3g0392 464 PANTHER PROTEIN REVEILLE 7-RELATED 3 452 - -
Lan3g0392 464 MobiDBLite consensus disorder prediction 207 243 - -
Lan3g0392 464 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 57 106 IPR006447 GO:0003677
Lan3g0392 464 MobiDBLite consensus disorder prediction 1 51 - -
Lan3g0392 464 SUPERFAMILY Homeodomain-like 53 107 IPR009057 -
Lan3g0392 464 MobiDBLite consensus disorder prediction 109 159 - -
Lan3g0392 464 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Lan3g0392 464 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Lan3g0392 464 MobiDBLite consensus disorder prediction 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0392 Lan-Chr3 2970661 2974841 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan3g0392 Myb_DNA-binding 1.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0392 - - lang:109338572 634.409