Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0389 ATGGTGATTACATCCACTGTTAAAGAACCAGAAGAACAAGGACAGAGTTTACACTGCACTTTTGCTTCCAGATATGTTCGTGATCCTGTTCCTAAGTTCAAGATGCCAGGGAAGTCAATACCAAAGGATGCAGCATATCAGATAATAAATGATGAATTGATGCTAGATGGTGCACCAAGGCTCAACTTGGCTTCCTTTGTGACCACTTGGATGGAGCCTGAGTGTGACAAACTCATCATGGATTCCCTTAACAAGAACTATGTTGACATGGATGAGTACCCTGTCACTACTGAACTTCAGAACCGGTGTGTTAATATGATAGCACACCTATTCCATGCTCCGATCGAAGAAGATGAGTGCGCCGTAGGTGTTGGAACTGTGGGATCATCAGAGGCAATAATGTTAGCAGGTCTAGCTTTTAAAAGGAAATGGCAGACAAAGAGAAAATCAGAAGGCAAACCATATGATAAGCCAAACATAGTTACTGGGGCTAATGTGCAGGTTTGTTGGGAAAAATTTGCAAGGTACTTTGAGGTTGAGCTGAAGGAAGTGAAACTTGCAGAGGGATACTATGTGATGGACCCTGCGAAAGCAGTTGAAATGGTGGACGAGAACACGATATGTGTTGCAGCCATTTTGGGGTCAACACTGACTGGGGAGTTTGAGGATGTGAAGCTTCTCAATGAACTTCTTACTAAGAAGAACAATGAGACAGGATGGAATATACCAATTCATGTTGATGCTGCAAGTGGAGGATTTGTTGCTCCATTTCTCTACCCTGATTTGGAGTGGGATTTCCGCGTGCCACTAGTGAAGAGCATCAACGTTAGCGGTCATAAGTACGGTCTTGTGTATCCCGGTGTTGGTTGGGTTGTCTGGAGGAGCAAAGATGACTTGCCTGATGAACTTGTTTTTCACATAAACTATCTCGGTTCTGATCAACCTACTTTCACCCTTAATTTCTCCAAAGGATCTAGTCAAATTATTGCTCAATATTACCAGTTTATACGGCTTGGCTTTGAGGGTTATAAAAGCGTCATGGAAAATTGCTTGGAGAATGCAAGAGTACTAAAGGAAGGAATAGAGAAACTAGGAAGGTTCAACATTCTCTCCAAGGACATAGGTGTGCCTCTAGTAGCCTTCTCTTTAAAAGAAAGTACCCAACACACAGTGTTTGAGGTTGCTGATCATCTAAGAAAATATGGATGGATAGTTCCAGCTTACACAATGCCACCGGATGCGCAAAACATCGCGGTGCTTCGCGTGGTAATCCGGGAAGATTTCAGCCATAGCTTGGCTGAGAGGCTTGTTTCTGACATAGAGAAAGTTGTGAAGCTCTTGGACACACTTCCTAGCCCTCTTTCAACCAAAGCTGCACATATCACTGCTATTACTAATGAGATAAGTGATGAGAAGGTTGGAAATAGTGCAATAGAGACTCAAAAAGAGATTGCCAAATATTGGAAGAGGCTTGTGGATGGTAAGAGAGTTGGAGCATGCTAA 1503 0.4291 MVITSTVKEPEEQGQSLHCTFASRYVRDPVPKFKMPGKSIPKDAAYQIINDELMLDGAPRLNLASFVTTWMEPECDKLIMDSLNKNYVDMDEYPVTTELQNRCVNMIAHLFHAPIEEDECAVGVGTVGSSEAIMLAGLAFKRKWQTKRKSEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLAEGYYVMDPAKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNNETGWNIPIHVDAASGGFVAPFLYPDLEWDFRVPLVKSINVSGHKYGLVYPGVGWVVWRSKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKSVMENCLENARVLKEGIEKLGRFNILSKDIGVPLVAFSLKESTQHTVFEVADHLRKYGWIVPAYTMPPDAQNIAVLRVVIREDFSHSLAERLVSDIEKVVKLLDTLPSPLSTKAAHITAITNEISDEKVGNSAIETQKEIAKYWKRLVDGKRVGAC* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0389 500 Gene3D - 69 363 IPR015421 GO:0003824
Lan3g0389 500 PANTHER GLUTAMATE DECARBOXYLASE 1 500 - -
Lan3g0389 500 Pfam Pyridoxal-dependent decarboxylase conserved domain 36 384 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lan3g0389 500 Gene3D - 1 68 - -
Lan3g0389 500 SUPERFAMILY PLP-dependent transferases 17 446 IPR015424 -
Lan3g0389 500 Gene3D - 364 451 - -
Lan3g0389 500 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 20 447 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lan3g0389 500 PANTHER GLUTAMATE DECARBOXYLASE 1 500 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lan3g0389 500 CDD DOPA_deC_like 62 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0389 Lan-Chr3 2907419 2930454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0389 12 500 Calmodulin-binding Proteins AT3G17760 77.236 0.0 796