Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0383 ATGGATGGGGATAATGGTCTTAACATACGTAATTGGGGTTACTACGAACCTGCCACATCGTTTAAGAGCCATTTGGGACTCCAGCTAATGTCATCAATGCCAGAGAAACCTATGCTTGGAACGCGCAATGCTGCGGTTTTATCCGGTAATCATGGTGGATTTCACCATAGGGATATTGGGATGCCCCATGCTGCATACCCGATGGATTACATGAGGGATGTTTGGATTAGTAGTCAGAGAGAGAAGTATATGAATATGATACCGACCAACCTGACTTATGGTGGTATTCCAGAGACATCTTCAGCACATCATATGCAGATGATTCAACCACCGAAGGATCAGAAGGAAGAAAGAGCTATTGAAGAAGAGCCTGTTGTTGAGAAGGTGAGCGGCACTGGTAAGAAAAGGCAGAGCAAGGTTCCCAAATCTCCCAAGGCAAAGAAGCCCAAGAGGGGGCCTCGTGTGCCTAAGGATGAACGTGCTCCTTCAGTTCAACGGGCAAGGGTTCCGAAGAAATCTGTTGAAATTGTAATAAACGGGATCGATATGGATATTTCCAGTATCCCAATTCCCGTTTGTTCATGCACTGGGACACCTCAACAATGTTATAGATGGGGCTCTGGTGGGTGGCAGTCTGCATGTTGCACAACAGGCATGTCAATGTATCCTTTGCCTATGAGTACCAAGCGACGTGGAGCTAGAATTGCTGGTAGAAAAATGAGTATAGGAGCATTTAAGAAAGTTCTAGAGAAGCTTGCAGCGGAGGGTTATAACTTTTCTAATCCAATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAATAAGTTTGTCACTATCAGGTAG 846 0.4504 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPMLGTRNAAVLSGNHGGFHHRDIGMPHAAYPMDYMRDVWISSQREKYMNMIPTNLTYGGIPETSSAHHMQMIQPPKDQKEERAIEEEPVVEKVSGTGKKRQSKVPKSPKAKKPKRGPRVPKDERAPSVQRARVPKKSVEIVINGIDMDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0383 281 MobiDBLite consensus disorder prediction 109 134 - -
Lan3g0383 281 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 281 - -
Lan3g0383 281 PANTHER - 1 281 IPR010409 -
Lan3g0383 281 Pfam GAGA binding protein-like family 1 281 IPR010409 -
Lan3g0383 281 MobiDBLite consensus disorder prediction 152 166 - -
Lan3g0383 281 MobiDBLite consensus disorder prediction 102 168 - -
Lan3g0383 281 SMART GAGA_bind_2 1 281 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0383 Lan-Chr3 2857098 2858803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0383 1 281 BBR or BPC Transcription factor family AT2G01930 50.671 1.78e-92 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lan3g0383 GAGA_bind 3.2e-110 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0383 - - gmx:606296 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0654 10 6208281 6209892 Lan3g0383 3 2857098 2858803 LSH