Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0380 ATGGCTCAGAATAAGAGTTTCTTCTCATCACAGAATCAGATTCCTGATCTTTCACTTAACATGAGTCTCCCATACGGTAGTGCTCCTTCTTCAGTTTGCACTGAAAGGGTTTCTTCTTCTTCTTCTTCTTCACCCTTTGATATAAGGAAAGCAGAAACTGATGAAGGTGCAGCCTTCAAATCCCACAGTGATAGTTCAATGAATTCAATCAGAGGAATTAGCCCTCACAAAACTACAAGCATAGAACTTTCCCTTTCCAACAATAACCCTACAAGTTCAACCCCTTCTGAGTCTGAGAGCCCTAGGAGAAGAAACCTTGTTAGATCAATCAGAGAATCACAAGTTACAACAACAACAACAACAACAACAACAACAACAACAAATCATGGAATAACAAGACCCTTTAATGGAACCCTTCTCTACACTAGTAACTTTCCTTCTTCTCCGGAAAACAATTCCTCAATAGAGAGAATAAACTCCAAGTTTTCACCATATGCTGATGCATATAGTAACCCTTCTAAATATTCAACTAGTTCAGATTTTTATAGTAATATTGGTGTTAAGGGTGTGGAACCAATCTCAAGATTTAATGGTATAACCATGGAAAGTTTAAGACCTCACCAAGAGTTTGAATACTTGAACCATCATCAGAAGCAACAACAACAACATCAGAATCAGTTTGGTGTTGATCAAGGTTCTGATTTTGCAAATGGATTTGTGAGGTCAAGAATGTGGCCAAGGCTGCAAAGTAAGAGAAACACAAGAGCACCAAGAATGCGTTGGACTAGTTCTCTTCATGCTCGTTTTCTTCATGCAGTTGAGCTTCTTGGAGGCCATGAAAGGGCTACTCCAAAGTCAGTTCTAGAACTCATGGATGTCAAAGATCTAACACTAGCTCATGTAAAGAGTCATTTGCAGATGTATAGGACTGTTAAAAATACTGACAAGACAGTACCCTACTCAGATGGAGAAGATTTCATGTCCCTAACACCAGCACTTAATCAAAATATTATGGACTATAATTCAAGCAATCTATTGGGAAATTCTTCTTCAAGTAAAGGAGCACGCATGCAAGTTAATTCTCAAGATTTGAATGAGCTTAGTTCAGAAGAAATCCTATCATCTCAGCATATTGGGAAGCTTTCCAAGGGAAGCAACTATATACAATCAAGAAGCTTCAAGGATCAAAATTTAGATTCACAGAATCTAAGCTTGGAGTTTACCTTAGGAAGATCAAATTGGCACAGCAATGAACATGCCTAA 1263 0.3816 MAQNKSFFSSQNQIPDLSLNMSLPYGSAPSSVCTERVSSSSSSSPFDIRKAETDEGAAFKSHSDSSMNSIRGISPHKTTSIELSLSNNNPTSSTPSESESPRRRNLVRSIRESQVTTTTTTTTTTTTNHGITRPFNGTLLYTSNFPSSPENNSSIERINSKFSPYADAYSNPSKYSTSSDFYSNIGVKGVEPISRFNGITMESLRPHQEFEYLNHHQKQQQQHQNQFGVDQGSDFANGFVRSRMWPRLQSKRNTRAPRMRWTSSLHARFLHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKTVPYSDGEDFMSLTPALNQNIMDYNSSNLLGNSSSSKGARMQVNSQDLNELSSEEILSSQHIGKLSKGSNYIQSRSFKDQNLDSQNLSLEFTLGRSNWHSNEHA* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0380 420 SUPERFAMILY Homeodomain-like 255 311 IPR009057 -
Lan3g0380 420 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 257 310 IPR006447 GO:0003677
Lan3g0380 420 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 420 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lan3g0380 420 MobiDBLite consensus disorder prediction 60 100 - -
Lan3g0380 420 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 420 - -
Lan3g0380 420 MobiDBLite consensus disorder prediction 18 47 - -
Lan3g0380 420 Pfam Myb-like DNA-binding domain 258 309 IPR001005 -
Lan3g0380 420 Gene3D - 256 313 - -
Lan3g0380 420 MobiDBLite consensus disorder prediction 18 134 - -
Lan3g0380 420 MobiDBLite consensus disorder prediction 110 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0380 Lan-Chr3 2836180 2843860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0380 238 415 G2-like Transcription Factor Family AT5G16560 46.766 1.67e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan3g0380 Myb_DNA-binding 2.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0380 - - lang:109340070 494.582