Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0370 ATGCAGTGGTCATTCTCAAACAAGGGTTCAGGCTTACCTCAGTTCCTATCATTTAAGGGCACTCAGGAAGATAGGCAAAGAAAAACAGTTCTTGATTCAATAGCTTCAACTGGATATATGACCACATCATCAACTAAGGATTCTTCTGAGTCTATCCAGAAATCATTCTCTGGTGTAGTCCAGAGAAATTTGTCCAGAAACCAACATGAAATCACAGTCTATCCACAACAATGTTTTGATACACATTCACCTTGCCATCAAGAATCAAGAATATTTCCAGTTTCCAACCGATCAAATCAAGTGAGTCGTGTTCTTCAATCTAGTGTTGCTATGACCGGATCGAACATGATCAATTCATCCTTAAAACCACAGCCTGTTTCTGTCCTTCCATCAATATGTTCCATTGTTGGCTCAACTGACCTAAGGAATTGTTCCAAATCCTCTGTCACCCCTTCTCAGCTTACCATTTTCTATGGTGGCTCTGTATGTGTTTATGATGACATATCTCCTGAGAAGGCTCAGTCTATAATGTTACTGGCTGGAAATAGTATAAAACCAATTCAGAACAGGACAGTTTCCACACCTAAATTGCAGCCAGAAATCTCTACTCCCTCCAATGATGATTGCATCATTGTAGGCAAATCCTATACCTCAATTCTGCCGAGCCCTCTCCCGGTGACCTCTCGTGCCGGTTCTCAGCCTGGTGGCGGATCTTCTAGCAGCAATGAACTCACAATACTAAGACCAGTAGGACCTTCAGCTACCCTTAGTAATCATTTACAATCTGCTAAAGTTGTTGGCTCTGTAGGATTTGCAGCTACAAAAATGGTTCAACAAGTTGGTGGCTTGCCTCAGGCGCGCAAAGCATCATTAGCTCGATTTTTGGAGAAGCGAAAGGAAAGGGTGGTTACAACATCACCATACTATATGAACAAGAAATCATCTGAATGCAGCACACCTGGATCAAGTGGTTTTAGTTTTTCCATCACTTCCTCTGATTCATGTTCTCTACCAGCCATTAACTAG 1026 0.4191 MQWSFSNKGSGLPQFLSFKGTQEDRQRKTVLDSIASTGYMTTSSTKDSSESIQKSFSGVVQRNLSRNQHEITVYPQQCFDTHSPCHQESRIFPVSNRSNQVSRVLQSSVAMTGSNMINSSLKPQPVSVLPSICSIVGSTDLRNCSKSSVTPSQLTIFYGGSVCVYDDISPEKAQSIMLLAGNSIKPIQNRTVSTPKLQPEISTPSNDDCIIVGKSYTSILPSPLPVTSRAGSQPGGGSSSSNELTILRPVGPSATLSNHLQSAKVVGSVGFAATKMVQQVGGLPQARKASLARFLEKRKERVVTTSPYYMNKKSSECSTPGSSGFSFSITSSDSCSLPAIN* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0370 341 MobiDBLite consensus disorder prediction 313 341 - -
Lan3g0370 341 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 214 IPR040390 -
Lan3g0370 341 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 215 341 IPR040390 -
Lan3g0370 341 MobiDBLite consensus disorder prediction 223 245 - -
Lan3g0370 341 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 1 214 - -
Lan3g0370 341 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 215 341 - -
Lan3g0370 341 SMART tify_2 147 182 IPR010399 -
Lan3g0370 341 ProSiteProfiles Tify domain profile. 147 182 IPR010399 -
Lan3g0370 341 Pfam tify domain 150 181 IPR010399 -
Lan3g0370 341 Pfam Jas motif 284 309 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0370 Lan-Chr3 2756007 2758958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0370 1 315 Tify Gene Family AT3G17860 37.879 1.48e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lan3g0370 tify 3.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0370 K13464 - gmx:100807288 367.081