Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0368 ATGTATCAAAATTCACGCTTTCAATTTCTGAACCAAAACCCATCAATTATGCCATTAATTCACACACTTACACCATCTTGTTATGCAACCCTCAACTCTCTCAACAATTATTCATTCCTCTCCAATGTTACTCTTCCTACCTTCGGATTCAGTCTCAACAAAACGCTTCATACCCATAACCCAAGTTTTGTTTTTTCAACCACAAGGAATCGTTTTCGTGTTTCTGTAATTAGTGCCAAAGCTGGAACAGATTACTATTCCACCTTGAATGTTAGCAGCAATGCTACCTTGCAAGAAATTAAGAGCTCATATAGGAAACTAGCTCGAAAGTACCATCCAGATATGAACAAAAGCCCAGGGGCAGAGGATAAGTTCAAGGAGATAAGTGCTGCATATGAGGTCCTATCAGATGATGAGAAAAGATCTTTATATGATCGCTTTGGTGAGTCAGGTCTACAAGGAGAAAATGGAGAATCAGCTAGTGCTTCTGGGGTTGATCCTTTTGATTTATTTGATGAATTATTTGGTCGTTCGGGAGGTATGTTTGGAAGTAGCGGTGAAGGTGGCATCAACTTCAGTTTGAGAAACAATAGAAACAGTGGTCTTGATATCCGGTATGACCTCCATTTGAGTTTTGAAGAATCAATTTTTGGAGGACGGAAGGAGATTGAAATTTCTTGTTCTCAGACATGTAATGATTGTGACGGTACAGGAGCTAAATCAAGGAATTGTATTAAACATTGCACAAATTGTGGTGGTAGAGGAGGAGAAATGAAAAGCCAGAGAACACCCTTTGGAATAATGTCTCAGGTTTCTACCTGCTCTAAGTGTAGTGGTCTTGGCAAGATAATCACTGACCACTGTCGAAGGTGCGACGGTAGCGGTCAGGTACAATCTAAACAAACAGTTAGCGTGGTCATTCCTCCTGGCGTCACTGATGGAGACACAACACAGATTCGAGGAGAAGGGAATTTTGATAAGAAGAGGAATATTAATGGGGATCTTTTTATAGTCATCCATGTTGCTGAAAAGCGTGGAATTCGGAGAGAAGGTCTTCATTTGTACTCAAACATTAATATTGACTTCACAGAGGCAATACTGGGCTCTGTTAAAAAGGTAGAAACTGTTGAAGGTATAAGGGATCTTAGAATTCCTTCTGGAATTCAACCTGGAGAGTCAGTGAAGTTGTCACGTTTGGGAGCACCAGACATGAATAAACCATCTAAACGAGGCGATCATTACTTCATTGTGAATGTTCTTATTCCTAAAGATATAAGTGGCGCCGAACGAGTACTGGTTCAGCAGTTAGCTTCACTAAGAGCATCTAGCAAAGATGATTCACTTTCTTCTGATGGCATTGGTATTAGGATACCTAAGGGAATATTCAGGGCTCCAGAAGGTCAAGCTTCAAGCAAGGGAATCAAAGATGTTGATTCTCTATGGAGATCAGTGAAGAACTTTTTAAGGGGAGGACAGTCTGAAGAAAGGTTCGCTTCGATAAGCCTCGATAGATCAGCGTCATTATGGAGATTTAGTCACCACAATCATTCAGTCTCATATTCTTTCTTTGTTGTCTTTATTATAACATGGATTTTTGCATCTATAGCTAAGTCTAAGTACTTGTTATTTCAGAAAAGAACCAAGTCCTTAACTTATAAAACAGAGAGAAAAACATTAAGGGTAAGAAAAAGTGGAAAATAG 1701 0.3945 MYQNSRFQFLNQNPSIMPLIHTLTPSCYATLNSLNNYSFLSNVTLPTFGFSLNKTLHTHNPSFVFSTTRNRFRVSVISAKAGTDYYSTLNVSSNATLQEIKSSYRKLARKYHPDMNKSPGAEDKFKEISAAYEVLSDDEKRSLYDRFGESGLQGENGESASASGVDPFDLFDELFGRSGGMFGSSGEGGINFSLRNNRNSGLDIRYDLHLSFEESIFGGRKEIEISCSQTCNDCDGTGAKSRNCIKHCTNCGGRGGEMKSQRTPFGIMSQVSTCSKCSGLGKIITDHCRRCDGSGQVQSKQTVSVVIPPGVTDGDTTQIRGEGNFDKKRNINGDLFIVIHVAEKRGIRREGLHLYSNINIDFTEAILGSVKKVETVEGIRDLRIPSGIQPGESVKLSRLGAPDMNKPSKRGDHYFIVNVLIPKDISGAERVLVQQLASLRASSKDDSLSSDGIGIRIPKGIFRAPEGQASSKGIKDVDSLWRSVKNFLRGGQSEERFASISLDRSASLWRFSHHNHSVSYSFFVVFIITWIFASIAKSKYLLFQKRTKSLTYKTERKTLRVRKSGK* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0368 566 ProSiteProfiles dnaJ domain profile. 84 148 IPR001623 -
Lan3g0368 566 Pfam DnaJ central domain 231 295 IPR001305 GO:0031072|GO:0051082
Lan3g0368 566 PANTHER EXPRESSED PROTEIN 90 445 - -
Lan3g0368 566 Hamap Chaperone protein DnaJ [dnaJ]. 81 477 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lan3g0368 566 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 90 445 - -
Lan3g0368 566 CDD DnaJ 84 137 IPR001623 -
Lan3g0368 566 Gene3D DnaJ domain 81 185 IPR036869 -
Lan3g0368 566 PRINTS DnaJ domain signature 86 104 IPR001623 -
Lan3g0368 566 PRINTS DnaJ domain signature 104 119 IPR001623 -
Lan3g0368 566 PRINTS DnaJ domain signature 120 140 IPR001623 -
Lan3g0368 566 PRINTS DnaJ domain signature 140 159 IPR001623 -
Lan3g0368 566 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 218 298 IPR036410 -
Lan3g0368 566 Pfam DnaJ domain 84 145 IPR001623 -
Lan3g0368 566 CDD DnaJ_C 203 425 - -
Lan3g0368 566 Gene3D - 231 295 - -
Lan3g0368 566 SMART dnaj_3 83 140 IPR001623 -
Lan3g0368 566 Gene3D - 201 337 - -
Lan3g0368 566 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Lan3g0368 566 ProSiteProfiles Zinc finger CR-type profile. 218 300 IPR001305 GO:0031072|GO:0051082
Lan3g0368 566 CDD DnaJ_zf 231 295 IPR001305 GO:0031072|GO:0051082
Lan3g0368 566 Pfam DnaJ C terminal domain 204 422 IPR002939 -
Lan3g0368 566 Gene3D - 347 439 - -
Lan3g0368 566 SUPERFAMILY HSP40/DnaJ peptide-binding domain 348 429 IPR008971 GO:0006457|GO:0051082
Lan3g0368 566 SUPERFAMILY Chaperone J-domain 81 190 IPR036869 -
Lan3g0368 566 SUPERFAMILY HSP40/DnaJ peptide-binding domain 203 341 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0368 Lan-Chr3 2722884 2729762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0368 85 145 C2H2 Transcription Factor Family AT1G74250 43.284 1.93e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0368 K03686 - gmx:100782135 769.615