Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0360 ATGGATCGTCAAAAAAAGGGTGGGCCAGAGGCAGAGTTTTTCACTGAGTATGGAGAGGCAAACTTGTACCAAGTCCAGGAAATTGTTGGAAAAGGAAGTTATGGTGTTGTAGGTTCTGCCATTGACTCCCAAACCGGAGAAAAGGTCGCGATTAAGAAGATTAATGATGTTTTCGAGCATGTATCAGATGCCACTAGGATCTTAAGAGAAATTAAACTCCTTCGGTTGCTCAAACATCCTGATATAGTAGAAATTAAGCATATAATGCTTCCTCCTTCAAGGAGAGAATTCAAGGATGTCTATGTCGTGTTCGAGTTGATGGAATCTGATCTTCATCAAGTAATTAAGGCAAATGATGATCTTACTCCTGAGCACTACCAATTTTTCTTGTACCAACTTCTAAGGGGCTTGAAATTTATACATACAGCGAATGTGTTTCATCGTGATTTGAAGCCAAAAAATATTCTTGCTAATGCTGATTGCAAATTGAAGATATGTGATTTCGGGCTTGCTCGAGTTTCATTTAATGATGCTCCATCAGCTATATTCTGGACAGACTATGTTGCAACTCGGTGGTATCGTGCACCTGAACTATGTGGATCTTTTTTCTCAAAATATACCCCCGGAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTAACTGGAAAGCCATTGTTTCCTGGTAAAAATGTGGTGCACCAATTGGATCTCATGACTGATTTGCTTGGTACTCCTCCTGATGAATCCATTTCGAGGATTCGGAATGAGAAAGCTAGAAGGTATCTTAGTAGCATGCGAAAAAAGCAACCAGTTCCATTCTCCAAAAAATTTCCTAATGCAGATCCGTCGGCTCTTATTTTGCTGCAGCGTTTAATTGCATTTGATCCTAAAGACCGTCCAACAGCTGAAGAGGCATTAGCTGATCCTTACTTCCATGGTTTGTCGAATGTGGAACGTGAACCATCCACTCAACCCATTTCCAAACTGGAGTTTGAGTTTGAGAAAAGGAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTAGAGTATCATCCCCAAATGCTCGAGGAATATCTTCGCGGGGGAGATCTAACAACAAGCTTCATGTATCCGAGTGGGGTTGATCGGTTCAAGCGACAATTTGCACATCTTGAGGAGCATAATGCCAAAGGTGAACGAAATACTCCATTACTGAGACAACATGTCTCCTTACCTAGAGAGCGAGTTGCTACTCCCAAGGATGGAAATAATCAAAGCAATGGATCAAATCTTCAGAATCCTCCAGGATCTGATGTGAACAATTCTGGAAACACAGATCCACGTAATCTAGCGAAGAGTGCCAGCATTACTTCAAGATGTATAGGCATGAAACAAAGTAAAGAATCAGAGGAAGAGCCAATTACTGAGATCAGTGATGAGACAGTGGATGAGTTAACACAAAAAGTTGTTGCCCTCAATGCTTATTTCAACCATGGTTAA 1500 0.4053 MDRQKKGGPEAEFFTEYGEANLYQVQEIVGKGSYGVVGSAIDSQTGEKVAIKKINDVFEHVSDATRILREIKLLRLLKHPDIVEIKHIMLPPSRREFKDVYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKFIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPGIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPPDESISRIRNEKARRYLSSMRKKQPVPFSKKFPNADPSALILLQRLIAFDPKDRPTAEEALADPYFHGLSNVEREPSTQPISKLEFEFEKRKLTKDDVRELIYREILEYHPQMLEEYLRGGDLTTSFMYPSGVDRFKRQFAHLEEHNAKGERNTPLLRQHVSLPRERVATPKDGNNQSNGSNLQNPPGSDVNNSGNTDPRNLAKSASITSRCIGMKQSKESEEEPITEISDETVDELTQKVVALNAYFNHG* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0360 499 ProSiteProfiles Protein kinase domain profile. 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0360 499 SUPERFAMILY Protein kinase-like (PK-like) 19 319 IPR011009 -
Lan3g0360 499 ProSitePatterns Protein kinases ATP-binding region signature. 29 53 IPR017441 GO:0005524
Lan3g0360 499 Pfam Protein kinase domain 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0360 499 CDD STKc_TDY_MAPK 23 359 - -
Lan3g0360 499 ProSitePatterns MAP kinase signature. 58 161 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lan3g0360 499 Gene3D Phosphorylase Kinase; domain 1 39 360 - -
Lan3g0360 499 SMART serkin_6 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0360 499 MobiDBLite consensus disorder prediction 414 476 - -
Lan3g0360 499 MobiDBLite consensus disorder prediction 419 463 - -
Lan3g0360 499 Gene3D Transferase(Phosphotransferase) domain 1 109 337 - -
Lan3g0360 499 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 436 - -
Lan3g0360 499 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0360 Lan-Chr3 2635347 2643798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0360 10 494 MAP Kinase Gene Family AT3G18040 77.426 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lan3g0360 Pkinase 1.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0360 - - gmx:100787677 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0461 10 3373843 3380462 Lan3g0360 3 2635347 2643798 LSH