Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0358 ATGAAGAATATCCTTAAGAAACTTCATATCATGTATAACCAATCAGAAAATGAACAAGGATCTTCTTCTTCATCAAACCGAAACAAGTTCAACAGTGATGGTTCATCTTCATCCTCTAAGAAGCTTAGTTCTGAGCATAAACCCTTTTCTGGACTCTCTAGTTTGTTGTATTCAGTTACCAATAAGCAAAGTCCTATTGATGCTACGAGTAGTTGTGGTTCCAATGTTGTTTTAGACTCAGCTAGGCATGATTCAGGGTTTAGCACATCAAGGGATCCTGAAGTTGAGGAAGAGTATCAGATACAATTGGCTTTAGAGCTGAGTGCAAAGGAGGATCCTGAGGCTGTGCAGATTGAAGCTGTTAAGCAGATTAGTTTGGGGTCTTGCGGCCCGGATTATACACCAGCTGAAGTCATGGCCTATAGATATTGGAATTACGATGCTCTTGGTTATGATGACAAGATCTTGGATGGTTTTTATGATCTATATGGGATCTTAACCGAGTCAACCTCCACTGGAATGCCTTCCCTTGTAGATCTGCAAGGAACACCAACCTCGGATAGTGTCACGTGGGAAGCTGTCTTGGTCAATAGGGCCGCTGACTCTAATTTGTTGATACTTGAGCAAAATGCCTTAGAGCTAACAGCCAAGTCTAGACCTGGTTTTGAAGAAGCTATGGATAGCAATTTGGTGCACAAGCTTGCAATATTTGTGGCTGACTATATGGGTGGACCGGTTGGAGATCCTGAAAGCATGAAAAGAGCATGGAAGAGTCTTAGTTACAGTCTGAAAGCAACCCTCGGTAGCATGGTTTTGCCACTTGGTTCTCTGACCATTGGATTGGCTCGGCATCGTGCATTGTTATTTAAGGTTCTAGCTGATAGTTTGGGCATTCCATGTCGGCTGGTTAAAGGACAGCAATATACAGGTTCCGAAGATGTGGCAATAAACTTTGTCAAGATTGATGATGGAAGGGAGTACATTATTGACCTAATGGCAGATCCTGGAGCACTTATTCCATCGGATGCAGTTGGGTCACATATAGAGTATGATGACTCTTTTTTTGTGACCAGTCCTTCATCAAGAGATCTTGATTTCTCTCGTGTAGCATCATCCAGCAGTGGCGCTGGAAGTTCATCTCAAGAAACCTCATATTTCCCGATGTTGGATAAAGGAAACAGATCGAAACATATTTCCTATGCAGGAAAAGAATCTGATGTAGGAAGGCCCTCTACAGGCAAAGAAGAATCATTGAGAACCTTGAATGAATTCAGAAATCCTCACAATGTTAAGAAGATAATAGGGAAGGAATCTTCTCGCAGACGTAATCATCCACATGTGCTGGCGAGATCTCTTTCTTGGACTGAAGGGATCAGTTCCCCGGATGTACATAGCATGAAAGTCAAAGATGTTTCTCTGTATATGATTGATGCTGCCAAGGAGAATCCTCACTTAGCTCAAAAACTTCATGATGTTTTACTTGAAAGTGGCGTTGTCGCTCCTCCACATTTATTTTCTGAAATTTATCGCGAGGAGTTAATTTCTCCAACCGAGGCCAACTTCCCGACTGAAGTAAAAGATGAACATAAATATGGAAGTGGACAGCAAGAATCACAGGTTGATAATAATCTCGGTACTACTCAATTTTTGTCTCCTTTGCCTCACTACTTACTTCATCCGAAAGCAACTCCTAGCTGTCAGTCGGAGCATTCCAAGCCTGTAGATACCTTAGGAATCAAGCCTCCTCTTGATACAAGGGTAGCAGATGGACAGCAGATACCATCTTGGGCAAAATATGGGGAAAATGTCCCGGTTGCTGCTGTTGCAGCAGCAGCTGCTGCTGTTGTTGCATCTTCTATGGTAGTTGCTGCAGCAAAGTCAGGCAATGACTCAAACATTGAGCTTCCCGTAGTAGCAGCTGCTACTGCTACTGCTGTAGCTGTAGTCGCAAGCACTGCAGCTGCCACTAGACTTTATGAGCAGGGCATTCGAAGCGATGGAGATACGGATGGTTCAGGTTATGACCTGAAGGGTAGTGGTGATGGAGAGCACTTTGCTTTAGGCATGAATTCAGAAGGCGAGAGAATATCTGATAGATCAGTAGCAAGTAATGCTAGCATAAAATCTGATTATGCGTTTGATGATGTTGCTGAGTATGACATTCCATTGGAGGAAATCACAGTGGGTGAGCGTATCGGACTTGGATCGTATGGGGAGGTTTACCACGGCGAATGGCATGGAACTGAAGTTGCTGTTAAGAGGTTTTTAGATCAAGATATATATGGTGAATCACTTGAAGAGTTCAAAAGTGAGGTCCAAATAATGAAAAGGTTGAGACATCCAAATGTTGTTCTCTTCATGGGAGCTGTAACCCGGCCTCCAAATCTTTCAATTGTTACCGAATTTCTTCCCAGAGGAAGTTTGTATAGATTACTTCATCGACCAAACAGTCAGTTAGACGTGAGAAGGCGGCTGAGGATGGCCCTTGATGCTCGAGGAATGAATTATTTGCACAACTGTACTCCAGTGATCGTGCATCGCGATTTAAAGTCACCAAATCTTCTTGTTGACAAAAACTGGGTTGTAAAGGTATGTGATTTTGGCTTATCACGAATAAAGCATAGTACATTCCTTTCTTCCAGATCCACTGCAGGAACAGCCGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAACCTTCAAATGAAAAGTGTGATGTTTATAGCTTTGGGATCATATTATGGGAGCTCTCTACTTTGCAGCAACCATGGGGAGGTATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTCCAACATCGTCGTCTCGACATTCCAGATGATATGGACCCTGCGATCGCAGATATTATAACGAAATGCTGGCAAACGGTGTTACTCTTGTATTATAGAGATCCAAAGTTGAGGCCAACATTTGCTGAAATAATGGCGGCTTTGAAGCCATTGCAGAAGCCAATTGTTGGTTCTCAAGTACCTAGACCAAGTGCACCGGGCAAGCATGAGAAGGCTCGGCCGTCACAAATTGCAGAAGACTGA 3051 0.4323 MKNILKKLHIMYNQSENEQGSSSSSNRNKFNSDGSSSSSKKLSSEHKPFSGLSSLLYSVTNKQSPIDATSSCGSNVVLDSARHDSGFSTSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCGPDYTPAEVMAYRYWNYDALGYDDKILDGFYDLYGILTESTSTGMPSLVDLQGTPTSDSVTWEAVLVNRAADSNLLILEQNALELTAKSRPGFEEAMDSNLVHKLAIFVADYMGGPVGDPESMKRAWKSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGQQYTGSEDVAINFVKIDDGREYIIDLMADPGALIPSDAVGSHIEYDDSFFVTSPSSRDLDFSRVASSSSGAGSSSQETSYFPMLDKGNRSKHISYAGKESDVGRPSTGKEESLRTLNEFRNPHNVKKIIGKESSRRRNHPHVLARSLSWTEGISSPDVHSMKVKDVSLYMIDAAKENPHLAQKLHDVLLESGVVAPPHLFSEIYREELISPTEANFPTEVKDEHKYGSGQQESQVDNNLGTTQFLSPLPHYLLHPKATPSCQSEHSKPVDTLGIKPPLDTRVADGQQIPSWAKYGENVPVAAVAAAAAAVVASSMVVAAAKSGNDSNIELPVVAAATATAVAVVASTAAATRLYEQGIRSDGDTDGSGYDLKGSGDGEHFALGMNSEGERISDRSVASNASIKSDYAFDDVAEYDIPLEEITVGERIGLGSYGEVYHGEWHGTEVAVKRFLDQDIYGESLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLLHRPNSQLDVRRRLRMALDARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRIKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGIILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDMDPAIADIITKCWQTVLLLYYRDPKLRPTFAEIMAALKPLQKPIVGSQVPRPSAPGKHEKARPSQIAED* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0358 1016 ProSiteProfiles Protein kinase domain profile. 726 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0358 1016 Pfam Ethylene-responsive protein kinase Le-CTR1 136 339 - -
Lan3g0358 1016 ProSitePatterns Protein kinases ATP-binding region signature. 732 753 IPR017441 GO:0005524
Lan3g0358 1016 MobiDBLite consensus disorder prediction 1002 1016 - -
Lan3g0358 1016 Gene3D Transferase(Phosphotransferase) domain 1 805 993 - -
Lan3g0358 1016 MobiDBLite consensus disorder prediction 992 1016 - -
Lan3g0358 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Lan3g0358 1016 Gene3D Phosphorylase Kinase; domain 1 719 803 - -
Lan3g0358 1016 CDD STKc_MAP3K-like 732 984 - -
Lan3g0358 1016 MobiDBLite consensus disorder prediction 10 48 - -
Lan3g0358 1016 SMART serkin_6 726 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0358 1016 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 1016 - -
Lan3g0358 1016 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 1016 - -
Lan3g0358 1016 Pfam Protein tyrosine and serine/threonine kinase 727 983 IPR001245 GO:0004672|GO:0006468
Lan3g0358 1016 SUPERFAMILY Protein kinase-like (PK-like) 709 982 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0358 Lan-Chr3 2616668 2625295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0358 1 1007 MAP Kinase Kinase Kinase AT1G73660 60.635 0.0 1112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lan3g0358 PK_Tyr_Ser-Thr 1.7e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0358 - - gmx:100816332 1467.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0871 17 11019969 11029973 Lan3g0358 3 2616668 2625295 PCT
Lan6g1011 6 9624291 9633254 Lan3g0358 3 2616668 2625295 PCT
Lan3g0358 3 2616668 2625295 Lan17g0871 17 11019969 11029973 PCT
Lan3g0358 3 2616668 2625295 Lan6g1011 6 9624291 9633254 PCT