Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0356 ATGACGCCACGCGCTGATGAATACGAAGAAGATAATCTCTCCTCAACCGACGACGACGAAGACGATGTAGCATTGAAGGAAGACATGGCCGCGTTATCACGTGCTTGTATGCTTGTTTCCGGCTCCGCCACCGCCGGTGATGGTGTTACTGCTCGGAGCAAAAACGACCACCATGAACTTGTCCTTCATGACGATGATGATGATGATGATGATAGTGGAGGGATTCTATTAGAGGATCCTCTGTTGGAATCCGGTGATGCTATTGTACCTTTGAAGAATGTTGATTCTGATTCTGATGATGATGATGATGAAGATGATTTGGAATGTCTTAGACGAGTTGAGAGCCTGTACCAGCCTCTTGCCTCTCTTCCGCCGCTGTCGCCGTTGAGGATAACGATGACGAATGCCTCTGGCAATAATGTTGATGATGAGGATGAGGATGATGATGAGGATGATTTGGAGACGCTTCGTGCCATTCGGTCACGGTTCTCTAGCTACAATGAAGGCGACATGGAAACACTGGTTGATGGAGATCAAACCTCATGTTTAGGCCACGAGGGTGAGACTGCCAATGGGTCTGTATCTGACAGATGGGATGTTGGTGAATTATGTGCTGTTTCTCCAATTCAGGATAATGCCACTGACTCTTTTCCCAGTAACGTTGAAGTGGAGCATTGTGGTTTGATTGACAGTTGTGAGCAGGATGCTTGCAGGTTGTCCAAGCTACCACAGAAAAGATCAAGCTTTCCTTCATCGGCTCAGGCCTTTATTGATGCCATCAATAAGAACAGATCTATGCAGCGGTTTCTTAGAAGTAAGCTGATTGAGATTGAAGCAAAAATTGAGGAGAACAAACAGCTAAGGAACAAAGTCAAAGTCATGAAGGACTTCCAGGCTGCATGCATTAGAAAAACAGGGAGTGCTTTATCACTAAAAAAGGATCCCCGTGTTCAGTTAATATCAGCAAAGAAACCTTCTGCTCCAAAAAACTCAAAGAGCCGTAATAAAAAAATATCTGCAATGTGTTATGGCCCAGCTGAGAATTCTCATGTCTCTAATTATAAGATGGTTTTAGAAAGATTTCCACTTTCCCTAGATCGTAAAAAATGGACAAATTCAGAAAGGGAGAATCTTAAGAAGGGAATTAAGCAACAATTCCAAGAAACGGTGCTTCAAAATTCAGCAGATAGAATAAGTTCAGAGTTCTCAGATGGATATGGAAATGACATGGATAGCATAATTGCATCTGTTAATGATCTTGAAATCACACCTGAGGATATTAAAAAATTTATACCTCAAGTTAATTGGGATAAATTAGCTTCAACATATGATGTTGGTCATACTGGTGCTGAATGTGAATCTAGGTGGTTGAATTATGAAGATCCCCTGATAAACCATGACCCGTGGACTGGCGAAGAGGATAAATCTCTTTTGCTTACTGTCCAAATTATGGGCATTAGGAACTGGTCTGGTATTGCTGTATCATTGGCCACAAATAGGACTCCATTTCAATGCTTAGCACGGTACCAAAGGAGCTTAAATGCTTCTATGCTAAATAGTGAATGGACTGAGGAAGAAGATGCTCAACTTTGTTCTGCTGTAGCATTATATGGTGAGCATGATTGGCAGTCTGTGGCTTCTGTTTTAGAACGGCGCACGGGAACCCAATGCTCAAATAGATGGAAGAAATCGCTTTATCCTGATAAGAAAGGGTGCTTTACGCGAGAGGAGGATGAACGCTTAACAGTAGCTGTCATGCTTTTTGGACGGAAATGGAGTCAAGTAGCTAAATTTGTTCCAGGCCGAATCCAGTCTCAGTGTAGGGACAGATACCTCAATAGTTTGGATCCTTCGTTGAAATGGGGTGGGTGGACAAAGGAAGAGGATTCAAGATTAAAAGATGCAATTGCCAAGCATGGATTCTGCTGGTCTAAGGTTGCTGAAGATTTGCTTCCTCGTACTGATTCTCAATGCCGGAAGAGGTGGAGGGTGCTATGTCCTGATCAAGTTCCTTTGCTTCGAGATGCTAGAAAGATGCAAAAGTTAACTGTTAATAGCAACTTTGTTGATCGAGAATCTGAACGCCCAGCACTCACATTGAAGGACTTTCTTCCTTTACCTATGTTGCCTCTTCTATCTGATGAGGCTGATGATGTGAAAGTCCCTAGAAAGCGAAAGTGGAAGTGGAGCAATGTTTCAAACAAAATGCGATCAAAAAGACAAGCAAGAAAAGCTCAAGTTTGTCTCAAAGATATAGCATTTAGTGATGGGGTCAAAATTTGTGATGAAGATGCTGTCAACATGGCATGTTTACGAAAGAGTAATTTTTTTCCAACCAATGACCAAGGGGATTTAAGTCGGCAAGATACAAGTGAGAAGTTTCTGTATTTTAATCCAATATGGAAATGGCAGGGTTGTACTGGACAAAACAAAGAGAACTGGAGCTGTACATTACCTTGTGAAAGCCCAGCATCTATGACTATCAGAGGGGCTGAACCATCAGAACACAAACAAAAGACTAAAATGCGAAAACCTGGAAGCTTATCTGCTTGTGTGGAGAGTTTGGATCAGGACAGGGACATTACTCTCGCTTCCTTGTTAAACCACAAATCAAAGAAGAACATAGCTTCTCACCCAAAAGTGAAAAAACAGAATGTAATGATTGATGATGATGGTGGTGGTGATGATGTGACACTTGCTTGCCTTCTGGCAAACAAATCGAAGAAACCAAATGAAGCTGCTAAAGGACGTCGTGCCTGCTGCTCTCCTTCGAAATTGAAAAAAGGATCTGTGTTACTTCCTGAGGTGCTTTGTACAAACAAGCCAGTCATCACAGCTGATGACAATGAGCTGTCACTGCCAGAGCTTGTTGAGGAGCAGCCTGTTTCCAGTGGTGCTGTAGCTGAACCCACAAACATCAACGTGGAGGGAGATGACTTGCTTGTTAACTTCCTGCAAAATAAGAGAAGGAAACAGCGAAAGAGAGCCCGAATCGGATAA 3000 0.426 MTPRADEYEEDNLSSTDDDEDDVALKEDMAALSRACMLVSGSATAGDGVTARSKNDHHELVLHDDDDDDDDSGGILLEDPLLESGDAIVPLKNVDSDSDDDDDEDDLECLRRVESLYQPLASLPPLSPLRITMTNASGNNVDDEDEDDDEDDLETLRAIRSRFSSYNEGDMETLVDGDQTSCLGHEGETANGSVSDRWDVGELCAVSPIQDNATDSFPSNVEVEHCGLIDSCEQDACRLSKLPQKRSSFPSSAQAFIDAINKNRSMQRFLRSKLIEIEAKIEENKQLRNKVKVMKDFQAACIRKTGSALSLKKDPRVQLISAKKPSAPKNSKSRNKKISAMCYGPAENSHVSNYKMVLERFPLSLDRKKWTNSERENLKKGIKQQFQETVLQNSADRISSEFSDGYGNDMDSIIASVNDLEITPEDIKKFIPQVNWDKLASTYDVGHTGAECESRWLNYEDPLINHDPWTGEEDKSLLLTVQIMGIRNWSGIAVSLATNRTPFQCLARYQRSLNASMLNSEWTEEEDAQLCSAVALYGEHDWQSVASVLERRTGTQCSNRWKKSLYPDKKGCFTREEDERLTVAVMLFGRKWSQVAKFVPGRIQSQCRDRYLNSLDPSLKWGGWTKEEDSRLKDAIAKHGFCWSKVAEDLLPRTDSQCRKRWRVLCPDQVPLLRDARKMQKLTVNSNFVDRESERPALTLKDFLPLPMLPLLSDEADDVKVPRKRKWKWSNVSNKMRSKRQARKAQVCLKDIAFSDGVKICDEDAVNMACLRKSNFFPTNDQGDLSRQDTSEKFLYFNPIWKWQGCTGQNKENWSCTLPCESPASMTIRGAEPSEHKQKTKMRKPGSLSACVESLDQDRDITLASLLNHKSKKNIASHPKVKKQNVMIDDDGGGDDVTLACLLANKSKKPNEAAKGRRACCSPSKLKKGSVLLPEVLCTNKPVITADDNELSLPELVEEQPVSSGAVAEPTNINVEGDDLLVNFLQNKRRKQRKRARIG* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0356 999 Coils Coil 270 290 - -
Lan3g0356 999 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 461 517 IPR017930 -
Lan3g0356 999 CDD SANT 521 565 IPR001005 -
Lan3g0356 999 CDD SANT 624 665 IPR001005 -
Lan3g0356 999 Pfam Myb-like DNA-binding domain 468 511 IPR001005 -
Lan3g0356 999 Pfam Myb-like DNA-binding domain 520 563 IPR001005 -
Lan3g0356 999 Gene3D - 520 569 - -
Lan3g0356 999 SUPERFAMILY Homeodomain-like 446 509 IPR009057 -
Lan3g0356 999 SUPERFAMILY Homeodomain-like 518 611 IPR009057 -
Lan3g0356 999 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 522 569 IPR017930 -
Lan3g0356 999 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 570 615 IPR017930 -
Lan3g0356 999 SMART sant 465 515 IPR001005 -
Lan3g0356 999 SMART sant 518 567 IPR001005 -
Lan3g0356 999 SMART sant 620 668 IPR001005 -
Lan3g0356 999 SMART sant 569 617 IPR001005 -
Lan3g0356 999 SMART sant 366 462 IPR001005 -
Lan3g0356 999 ProSiteProfiles Myb-like domain profile. 461 513 IPR001005 -
Lan3g0356 999 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 616 670 IPR017930 -
Lan3g0356 999 ProSiteProfiles Myb-like domain profile. 569 615 IPR001005 -
Lan3g0356 999 ProSiteProfiles Myb-like domain profile. 616 666 IPR001005 -
Lan3g0356 999 Gene3D - 464 513 - -
Lan3g0356 999 MobiDBLite consensus disorder prediction 56 105 - -
Lan3g0356 999 Gene3D - 621 668 - -
Lan3g0356 999 Gene3D - 570 620 - -
Lan3g0356 999 SUPERFAMILY Homeodomain-like 595 668 IPR009057 -
Lan3g0356 999 MobiDBLite consensus disorder prediction 1 22 - -
Lan3g0356 999 ProSiteProfiles Myb-like domain profile. 514 565 IPR001005 -
Lan3g0356 999 CDD SANT 573 615 IPR001005 -
Lan3g0356 999 Pfam Myb-like DNA-binding domain 573 632 - -
Lan3g0356 999 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 142 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0356 Lan-Chr3 2594623 2601094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0356 242 767 MYB-Related Transcription Factor Family AT3G18100 51.115 1.56e-177 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan3g0356 Myb_DNA-bind_6 4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0356 K09422 - gmx:100818474 908.286