Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0337 ATGGCAGAGTTCACACAAGATTTTCAAAGCTTTATTGATCCAAGCATGGAACTCATAAATCAATTCATAGGGATTAACACACATGTACTAGACAACTCACATGTAAACATGCAGAATTCGATGATTCCTTTCTCTAGTGACAGCTTCTTTGCCTCTCAACAAGAACCTGAATTTCAAGGAAACTTTGAAGAAAATTTTCAAGGCCTTGTTAACAATGCACTTCATGTTTCCCTTCCCATTTTTGCAGCAGAAAATGAAGGCCATGGAGGTAAAAAGAGGAATACAATGGATACTACTCATGAAGCTAGTTCAGCAAATTCAACTCCTGTAGGTTCTGAGAGTGGAGGAAAGATAAGAAATAATTTTGGAAGAGGTAAGAGAGTAAAAAGCAATGTAACAGATGAGGAGAAACCAAAGGAAGTGGTTCATGTTAGAGCAAGAAGAGGTCAAGCTACTGATAGTCACAGCATAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAAAAACTAAGGTACTTACAGAACATTGTCCCAGGATGTTACAAGACTATGGGCATGGCAGTGATGTTGGATGAAATCATAAACTATGTCCAATCCTTGCAGCATCAAGTGGAGTTCCTTTCTTTGAAGCTTACTGCAGCAAGTAACTTTTATGACTTCAATTCAGAGACAGATGCTTTTGAAACCATGCAGAGAGCAAAAGCATCTGAGGCAAAAGAGTTGGGAAATTATGAAAGAGTCACTTGCTTCCAACCAACATGGTCCCTTTGA 771 0.3878 MAEFTQDFQSFIDPSMELINQFIGINTHVLDNSHVNMQNSMIPFSSDSFFASQQEPEFQGNFEENFQGLVNNALHVSLPIFAAENEGHGGKKRNTMDTTHEASSANSTPVGSESGGKIRNNFGRGKRVKSNVTDEEKPKEVVHVRARRGQATDSHSIAERVRRGKINEKLRYLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASNFYDFNSETDAFETMQRAKASEAKELGNYERVTCFQPTWSL* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0337 256 MobiDBLite consensus disorder prediction 128 155 - -
Lan3g0337 256 CDD bHLH_AtBPE_like 140 225 - -
Lan3g0337 256 Pfam Helix-loop-helix DNA-binding domain 154 201 IPR011598 GO:0046983
Lan3g0337 256 Gene3D - 147 217 IPR036638 GO:0046983
Lan3g0337 256 SMART finulus 156 206 IPR011598 GO:0046983
Lan3g0337 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 150 200 IPR011598 GO:0046983
Lan3g0337 256 PANTHER TRANSCRIPTION FACTOR BEE 1 2 255 - -
Lan3g0337 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 148 215 IPR036638 GO:0046983
Lan3g0337 256 MobiDBLite consensus disorder prediction 85 155 - -
Lan3g0337 256 MobiDBLite consensus disorder prediction 99 115 - -
Lan3g0337 256 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 255 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0337 Lan-Chr3 2404795 2406801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0337 1 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 51.711 7.76e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan3g0337 HLH 5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0337 - - gmx:100806942 362.459