Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0319 ATGAAGAAGAAAACATTTTCCCCTATTCTCTTACTCCTTTTCATTCCTTTCTTGTTTCAAACCACATTCTCATTCTCTTTTTCCAACTCTCAATCTTTCACTGTTAACCATGGATCCCTTACGGACTCAGAACTCTCTTATATCACACAGCGTCAGCTTCTCTATTACAAAGACCAGTTTGGTGATAGAGGAGAGAATGTTACTGTAGACCCAACCTTGGTCTTTGAGAACAACCGCATCAGAAATGCTTACGTGGCACTTCAGGCGTGGAAGCAAGCTATTTTCTCTGATCCTCATAATCTAACGCTGGATTGGGTGGGATCTGATGTGTGTAACTACACGGGGGTGTTCTGTGCACCTGCTTTGGATAACCATAAGATAAGGACGGTTGCTGGAATCGACCTTAACCATGGTGACATTGCTGGTTATTTACCGGAGGAGCTTGGGCTTCTAACGGATCTTGCGCTTTTCCATATTAATAGTAACCGCTTCTGTGGAACGGTTCCGAGAACGTTTGAGAAGTTGGTGATTCTGTTTGAGTTGGATCTGAGTAATAACCGCTTTGCTGGGAAGTTTCCGGCGGTGGTGTTACGGTTACCGAAGCTGAAGTTTCTGGATCTGAGGTTTAATGAATTTGAAGGAACGGTGCCGAAGGAGTTGTTTGATAAAGACCTGGATGCGATTTTCATTAATGATAATCGGTTTGTGTTTGATATTCCTGAGAATTTCGGGAATTCACCGGTGTCGGTGATTGTTCTGGCGAACAACCGTTTCCATGGTTGTGTTCCGTCGAGCCTTGGAAACATGTCGAATCTGAATGAGATTCTTTTGCTGAACAATGCGCTTCGTTCGTGTTTTCCTCAGGAGATTGGGCTTCTGAAGAATCTTACGGTGTTTGATGTTAGCTTCAACCAGCTCTTGGGACCGTTGCCTGAGAGTCTCGGAGGAGCGGTGAGTTTGGAGCAGCTTAATGTGGCGCATAACTTGCTCTCTGGAGTGATTCCGGCGAGTGTATGCAATCTTCCGAATCTTCAGAATTTTACTTATTCTTATAACTTTTTCACTGGAGAGCCACCCAAGTGTTTGGCTTTGGCGGCGTTTGATGATCGGAGGAATTGTATTCCGGCGAGACCACTGCAACGGACTGAGAGGCAATGTAAGTCATTTTTGTCAAAACCTGTGGATTGTAACTCTTTTAGGTGCAAGCCTTTTGTTCCTTCCTTGCCCCCTCCGCCGGTTGCACTTCCTCCACCTGTTCCCAAGTCCCCGCCTCCGCCAGTATATTCACCGCCGCCACCTCCACCAGTATATTCACCTCCACCACCTCCACCGGTATATTCACCACCTCCACCGGTATATTCACCTCCACCACCACCACCTTCCTCACCCCCACCGCCAGTAATTTCACCGCCTCCACCTTCACCACCACCACCAGCACCCGTATACTGTGTCCGATCTCCACCGCCCCCACCACCAAATTCACCACCCCCACCCCCACCAAATTCACCACCACCACCGGCTCCTGTATTCTCCCCACCACCTCCTGTATCTTACTACTATAACTCACCACCACCACCGTCACATTCACCCCCACCCCCATCACCACCACCTCCATCACATTCGCCTCCACCACCACCTCCACACTCACCACCACCACCACCAGTTTATCCCCATTTGTCACCACCACCTCCGCCCCCAGTTCACTCTCCACCTCCACCCCCACTCCCATCTCCACCTCCACCGCTCTATTCACCCCCACCACCACCTCCTTGTATAGAACCACCACCACCATCTCCACCACCTTGTGTAGAACTCCCACCACCCCCACCACCCCCACCATCACCACCACCTTGTGAAGAGAACTCACCACCCCCATATGCAACACCTTACCTGCCACCACCATCACCATCACCACCAGTTCAATACAATTCACCACCGCAGTCACCACCACCCGCACCTGTATATGAAGGGCCATTGCCACCAGTTATTGCAGTCTCATATGCATCACCTCCTCCTCCACCCTTTTATTGA 2031 0.4973 MKKKTFSPILLLLFIPFLFQTTFSFSFSNSQSFTVNHGSLTDSELSYITQRQLLYYKDQFGDRGENVTVDPTLVFENNRIRNAYVALQAWKQAIFSDPHNLTLDWVGSDVCNYTGVFCAPALDNHKIRTVAGIDLNHGDIAGYLPEELGLLTDLALFHINSNRFCGTVPRTFEKLVILFELDLSNNRFAGKFPAVVLRLPKLKFLDLRFNEFEGTVPKELFDKDLDAIFINDNRFVFDIPENFGNSPVSVIVLANNRFHGCVPSSLGNMSNLNEILLLNNALRSCFPQEIGLLKNLTVFDVSFNQLLGPLPESLGGAVSLEQLNVAHNLLSGVIPASVCNLPNLQNFTYSYNFFTGEPPKCLALAAFDDRRNCIPARPLQRTERQCKSFLSKPVDCNSFRCKPFVPSLPPPPVALPPPVPKSPPPPVYSPPPPPPVYSPPPPPPVYSPPPPVYSPPPPPPSSPPPPVISPPPPSPPPPAPVYCVRSPPPPPPNSPPPPPPNSPPPPAPVFSPPPPVSYYYNSPPPPSHSPPPPSPPPPSHSPPPPPPHSPPPPPVYPHLSPPPPPPVHSPPPPPLPSPPPPLYSPPPPPPCIEPPPPSPPPCVELPPPPPPPPSPPPCEENSPPPYATPYLPPPSPSPPVQYNSPPQSPPPAPVYEGPLPPVIAVSYASPPPPPFY* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0319 676 MobiDBLite consensus disorder prediction 451 507 - -
Lan3g0319 676 Gene3D Ribonuclease Inhibitor 82 373 IPR032675 -
Lan3g0319 676 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 22 495 - -
Lan3g0319 676 MobiDBLite consensus disorder prediction 521 663 - -
Lan3g0319 676 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 22 495 - -
Lan3g0319 676 SUPERFAMILY L domain-like 84 362 - -
Lan3g0319 676 Pfam Leucine rich repeat N-terminal domain 86 118 IPR013210 -
Lan3g0319 676 Pfam Leucine rich repeat 155 211 IPR001611 GO:0005515
Lan3g0319 676 PRINTS Proline rich extensin signature 405 426 - -
Lan3g0319 676 PRINTS Proline rich extensin signature 428 444 - -
Lan3g0319 676 PRINTS Proline rich extensin signature 447 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0319 Lan-Chr3 2249944 2253006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0319 40 401 Leucine-rich Repeat extension Gene Families AT3G24480 76.309 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0319 - - zju:107431856 644.81