Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0316 ATGGCTGATCTCACCAATGGTCACCACCACCATGCTTCTTCCATCAAGATACCTTCAATCAAATTCACCAAACTCTTCATCAATGGACAATTTGTTGATTCCATTTCAGGGAAGGAGTTTGAGACAATTGATCCAAGAACAGAGGAAGTAATTGCAAAAATCTCAGAGGGAAGAAAGGAAGACATTGATGTTGCTGTGAAAGCATCACGTATTGCTTTTGATAATGGTCCATGGCCTCGTATGCCAGGCAGTGAAAGAGCAAAAATTATGATGAAATGGGCAGACATAATTGAAGAAAACATAGAAGAGTTAGCAGCATTGGATACAATTGATGCTGGAAAATTGTACAATTGGTGTAAAGCTGTTGACATTCCTGGAGTAGCCAATACTATACGCTATTATGCTGGTGCTGCTGATAAAATTCATGGAGAGGTGTTAAAACCATCTAGGGAGTTGCATGCATATACTTTGATGGAACCAATTGGTGTTGTTGGTCACATTATTCCATGGAATTTCCCTAGTACTATGTTTGCTGCAAAGGTTGCTCCTGCTTTGGCCGCAGGTTGCACCATGATCCTTAAGCCTGCTGAACAAACACCTCTTTCAGCTTTGTTCTATGCTCATCTAGCTAAGCAGGCTGGAATTCCAGATGGAGTGCTCAATGTAGTGCCTGGATTTGGTCATAATGCAGGTGCTGCAATAAGCTCACACATGGACATCGATAAGGTTAGCTTTACTGGTTCGACAGATGTAGGCCGCGAAGTAATGACGGCCGCTGCTAAGAGTAATTTAAAACCAGTTTCACTTGAATTAGGAGGCAAGTCTCCCCTTGTAATTTTTGATGATGCTGATGTAGATAAAGCTGTTGAGCTTGCTCTCTTAGGCATCCTATTTAACAAGGGAGAAATTTGTGTAGCTAGTTCTCGTGTGTTTGTTCAGGAAGGTATCTATGATGAATTTGAGAAGAAATTGGTGGAAAAAGCAAAAACTTGGTTGGTTGGGGACCCTTTTGATCCTAAATCTCAACAAGGACCTCAGGTTGACAAGAAGCAATTTGAAAAAATTCTTTCCTATATTGAGCATGGGAAGAGAGAAGGAGCCACCCTTTTGACAGGAGGTAAAAGAGTGGGAAATAAAGGATACTACATTGAACCTACAATTTTCTCCAATGTTAAGGAGGACATGCTCATAGTTCAAGATGAAATATTTGGCCCAGTGATGTCATTGAAGAAGTTTAAGACTATTGAGGAAGGAATCAAGAGTGCTAACAATACCAAATATGGCCTAGCAGCAGGAATTGTGACAAAGAATTTGGATATAGCAAACACTGTTTCAAGGTCAATTAGAGCAGGGATTGTGTGGATAAACTGTTACTTTGCCTTTGGGAATGACATTCCTTATGGAGGGTATAAGATGAGTGGATTTGGAAGAGATTTTGGTTTGGAAGCCCTCCACAAGTACTTACAAGTGAAATCTGTTGTAACCCCAATTTACAATTCTCCTTGGCTTTGA 1512 0.4048 MADLTNGHHHHASSIKIPSIKFTKLFINGQFVDSISGKEFETIDPRTEEVIAKISEGRKEDIDVAVKASRIAFDNGPWPRMPGSERAKIMMKWADIIEENIEELAALDTIDAGKLYNWCKAVDIPGVANTIRYYAGAADKIHGEVLKPSRELHAYTLMEPIGVVGHIIPWNFPSTMFAAKVAPALAAGCTMILKPAEQTPLSALFYAHLAKQAGIPDGVLNVVPGFGHNAGAAISSHMDIDKVSFTGSTDVGREVMTAAAKSNLKPVSLELGGKSPLVIFDDADVDKAVELALLGILFNKGEICVASSRVFVQEGIYDEFEKKLVEKAKTWLVGDPFDPKSQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKRVGNKGYYIEPTIFSNVKEDMLIVQDEIFGPVMSLKKFKTIEEGIKSANNTKYGLAAGIVTKNLDIANTVSRSIRAGIVWINCYFAFGNDIPYGGYKMSGFGRDFGLEALHKYLQVKSVVTPIYNSPWL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0316 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 269 276 IPR029510 GO:0016491
Lan3g0316 503 Pfam Aldehyde dehydrogenase family 32 493 IPR015590 GO:0016491
Lan3g0316 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 273 462 IPR016163 GO:0016620
Lan3g0316 503 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 6 503 - -
Lan3g0316 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 297 308 IPR016160 GO:0016491
Lan3g0316 503 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 6 503 - -
Lan3g0316 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 491 IPR016162 GO:0016491
Lan3g0316 503 SUPERFAMILY ALDH-like 13 499 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0316 Lan-Chr3 2213172 2219581 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0316 4 503 Aldehyde Dehydrogenase Gene Family AT3G24503 72.655 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0316 K12355 - gmx:100783920 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0395 10 2734298 2746882 Lan3g0316 3 2213172 2219581 LSH