Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0315 ATGTCAAATCTGAGCAACGACCACAACCATAATGACTCATTTATCAAGATTCCAACAATAAAGTTTACTAAGCTTTTCATCAATGGAGAATTCGTGGATTCGGTTTCAGGAAAAACGTTTGAGACCGTGGATCCAAGAACAGAGGAAGTGATAACAGAAATAGCAGAGGCTACAAAAGAAGATGTTGGTATTGCTGTGAAGGCTGCACGTGAGGCATTCGATTCCGGTCCATGGCCACGCATGACCGGTGCTGAGAGAGCAAAGATTATGCTGAAATGGGCAGAGCTAATTGATCAGAACCTAGAAGAAATAGCAGCATTGGATACAATTGATGGTGGAAAATTATACAGTTGGTGTAAGACTGTGGACATTCCTGCAGCAACCAATATTCTGCGTTACTATGCTGGTGCTGCTGATAAAATTCATGGACAAGTGTTCAAAACATCAAGGAACCTTCACTTGTATACTTTGATGGAACCTGTTGGTGTTATTGGACAGATTATCCCTTGGAATTTCCCTACCATCATGTTCTTCACCAAGGCTAGTCCTGCCTTGGCTGCTGGGTGCACCGTGGTCCTTAAGCCGTCCGAGCAAACGCCTCTCTCGGCTCTCTTTTATGCTCATCTTGCTAAACTGGCTGGTATCCCAGATGGAGTGCTCAATGTAGTACCCGGGTTAGGCTCGAATGCTGGAGCTGCAATAAGCTCACATATGGACATTGATGCGGTCAGTTTTACAGGTTCAACAGAAACAGGTCGCGAAGTAATGAAGGCTGCAGCCATGAGTAATCTGAAACCTGTCTCGCTCGAATTAGGAGGCAAGTCACCAGTCTTAATTTTTGATGACGCCGATGTGGACGAAGCTGTTGATCTTGCTCTCTTTGGCATCCTACACAACAAGGGAGAAATCTGTGTTGCATTTTCCAGAGTTTATGTCCAGGAAGGGATTTATGATAAGTTTGAGAAGAAGGTGCTGGAGAAGGCCAAAAATTGGGTAGTTGGAGACCCTTTTGATCCTAAAGTTCAACAAGGTCCTCAAACTAGTAAGGCGCAATTTGATAAAATTCTTTCCTATATTGAGCATGGAAAGAAAGAAGGAGCCACCCTCTTGACTGGTGGTAAGAAACTAGGCAACAAGGGATACTACATTGAACCTACTATTTTCACCAATGTTAAGGAGGACATGCTAGTATCACAAGATGAAATATTTGGACCTGTGATGGTACTTTCTAAGTTCAAGACTATTGAGGAAGCAATTAAGACAGCCAACAACACAAGATATGGTTTAGCAGCAGGGATTGTTACAAAGAACTTGAATATTGCCAACAGTGTTTCAAGGTCTATTCGTGCAGGAATCATTTGGATCAATTGCTTTTTTGCCTTTGATATTGATTGCCCTTTTGGAGGGTTTAAGATGAGTGGTTTTGGAAAAGATTATGGATTAGAAGCACTTCATAAGTACCTTCAAGCTAAATCTGTTGCTACTCCTATTTATAATTCTCCTTGGCTTTGA 1512 0.422 MSNLSNDHNHNDSFIKIPTIKFTKLFINGEFVDSVSGKTFETVDPRTEEVITEIAEATKEDVGIAVKAAREAFDSGPWPRMTGAERAKIMLKWAELIDQNLEEIAALDTIDGGKLYSWCKTVDIPAATNILRYYAGAADKIHGQVFKTSRNLHLYTLMEPVGVIGQIIPWNFPTIMFFTKASPALAAGCTVVLKPSEQTPLSALFYAHLAKLAGIPDGVLNVVPGLGSNAGAAISSHMDIDAVSFTGSTETGREVMKAAAMSNLKPVSLELGGKSPVLIFDDADVDEAVDLALFGILHNKGEICVAFSRVYVQEGIYDKFEKKVLEKAKNWVVGDPFDPKVQQGPQTSKAQFDKILSYIEHGKKEGATLLTGGKKLGNKGYYIEPTIFTNVKEDMLVSQDEIFGPVMVLSKFKTIEEAIKTANNTRYGLAAGIVTKNLNIANSVSRSIRAGIIWINCFFAFDIDCPFGGFKMSGFGKDYGLEALHKYLQAKSVATPIYNSPWL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0315 503 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 8 503 - -
Lan3g0315 503 Pfam Aldehyde dehydrogenase family 31 493 IPR015590 GO:0016491
Lan3g0315 503 SUPERFAMILY ALDH-like 15 499 IPR016161 GO:0016491
Lan3g0315 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 269 276 IPR029510 GO:0016491
Lan3g0315 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 273 462 IPR016163 GO:0016620
Lan3g0315 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 491 IPR016162 GO:0016491
Lan3g0315 503 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE 8 503 - -
Lan3g0315 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 297 308 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0315 Lan-Chr3 2185523 2190101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0315 4 503 Aldehyde Dehydrogenase Gene Family AT3G24503 66.667 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0315 K12355 - gmx:100784449 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0911 17 11980939 11990611 Lan3g0315 3 2185523 2190101 PCT
Lan6g1098 6 10652797 10657466 Lan3g0315 3 2185523 2190101 PCT
Lan3g0315 3 2185523 2190101 Lan17g0911 17 11980939 11990611 PCT
Lan3g0315 3 2185523 2190101 Lan6g1098 6 10652797 10657466 PCT