Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0299 ATGAATAGAGGTGTTCTTCAAAGCTCATCACCAGTGCAACAAATGATGGCTGGGAACCCTAATTGGTGGAACATCAATACTATGAGGCCTCCTAATGCTTCACAAACTCCTCATTTCTTCTCAAATACTACTCCTTCTAACTTTCTCACTCCATACCCTCAAACTTCTTCTTTTCCTTTCACTTCTTTGCATGATAATCAAGAGCTTCCTGAGTCATGGAGCCACCTACTCATGGATGGACTTGTGGGTGAAGAAGATAAGGGTGTTATGGATCAGTTTCAGACTAAGAGGTTAGAGAATTGTTGGGAGGATCAAATGCTAAGTCAAGCTCCAAATGCTTCTTTTGTTGATGTTAAACAAGAAAGGTCAGTTAATAGCTATGTGTATGGACATGGAAATGAACATGAACTTCAAACACCAACAAAGACTACTACTTGGTCTCCAAATTCATGTGTCACTAGTTTCAGCACCAACATGCTTGATTTTTCTAAGAATGATGCAAGGCATCCACCACCAGATCCATCTTCTGAGTGCAACAGCACTGGTGGTGGGGCAGTGAAGAAAGCTAGGGTTCAAGCTTCCACAACTCAGTCTACAATGAAGGTTAGGAAGGAGAAGTTAGGTGACAGAGTTACAGCACTTCATCAACTTGTTTCCCCATTTGGGAAGACTGACACAGCATCTGTCTTGTTAGAAGCTATTGGGTATATTAGATTCCTTCAGAGTCAAATTGAGGCCCTTACTTTACCATACATGAGCAGTGGATCAGGAAACCCGAGGCACCAACACTCAGTTCATGGAGAGAAGAATTGTATATTCCCTGAAGACCCTGGTCAGCTGGTGAATGAAAACTGCTTGAAGAGGAAAGCACCTATTGAGCAGGATTATCAAGAAGAACCAAATAAGGACCTGAAGAGTAGAGGGTTGTGCCTAGTTCCAGTGTCATGCACACAACAAGTTGGAAGTGAGAGTGGAGCTGATTATTGGGCACCTACCCTTGGAGGGGGCTTTCAGTAG 1017 0.4297 MNRGVLQSSSPVQQMMAGNPNWWNINTMRPPNASQTPHFFSNTTPSNFLTPYPQTSSFPFTSLHDNQELPESWSHLLMDGLVGEEDKGVMDQFQTKRLENCWEDQMLSQAPNASFVDVKQERSVNSYVYGHGNEHELQTPTKTTTWSPNSCVTSFSTNMLDFSKNDARHPPPDPSSECNSTGGGAVKKARVQASTTQSTMKVRKEKLGDRVTALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALTLPYMSSGSGNPRHQHSVHGEKNCIFPEDPGQLVNENCLKRKAPIEQDYQEEPNKDLKSRGLCLVPVSCTQQVGSESGADYWAPTLGGGFQ* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0299 338 CDD bHLH_AtbHLH_like 201 247 IPR045239 -
Lan3g0299 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 191 240 IPR011598 GO:0046983
Lan3g0299 338 Gene3D - 192 252 IPR036638 GO:0046983
Lan3g0299 338 PANTHER OS05G0228400 PROTEIN 17 324 - -
Lan3g0299 338 MobiDBLite consensus disorder prediction 166 186 - -
Lan3g0299 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 201 252 IPR036638 GO:0046983
Lan3g0299 338 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 17 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0299 Lan-Chr3 2032216 2037216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0299 1 280 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 45.098 1.21e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0299 - - gmx:100785156 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1117 6 10946493 10953255 Lan3g0299 3 2032216 2037216 PCT
Lan3g0299 3 2032216 2037216 Lan6g1117 6 10946493 10953255 PCT