Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0285 ATGACAACATTAAACCAAACATGTCTTAAATCACCATTTTACTCTCTTCTAGCTTTCTTCATCATTATCAGCAATGCAAACTCTCAGTCTCAGCTATATGATCAAGAACATGCAGTTCTTTTGAAGATAAAGCAATACCTTAAAAACCCTTCTTTCCTTAGTCACTGGATCTCATCAAACTCCTCACACTGTTCTTGGCCAGAGATCACTTGCATCAATGGCTCTATCACTGGACTTGCTCTTGTTAATACTGATATCAATCAAACAATACCAACTTCCTTATGTGACCTCACAAACCTTACACATGTTGATTTCAACTTGAATTATATTCCTGGAGAGTTTCCAATATATCTCTACAACTGTTCCAAGCTTCAGTACTTGGACCTCTCAATGAACAACTTTGTTGGTAAGATACCTGATGACATTGATAGCTTGTCCAATTTACAGTATCTGAACCTTAGTTACACCAACTTCACTGGTGACATTCCTTCCAGCATTGGAAGGTTAAAGGAACTGAGACATCTTCCACTTCAGTATTGTTTATTCAATGGAACTTATCCTGATGAGATTGGCAATTTGTCCAATCTTGAAACCTTGGATTTGTCCTCTAATTATGAACTCCCTTCTTCGAAGTTGCCGTTGAGCTGGACCAAGTTGAACAAATTGAAGGTCTTTTATATGTATGGCTGCAACTTGGTTGGTGAAATTCCTGAAAACATTGGAGAAATGGCAGCTTTGGAGAAATTGGATATATCACAAAACAGTTTAACTGGACACATTCCAAGTGGCTTGTTCATGCTGAAGAATCTGAGCATACTCTATCTTTTTCAGAACATTCTTTCCGGGGAGATACCTGGTGTGGTTGAAGCGTTTAATTTGACTATCGTTGATCTCACAAACAATGATCTTACAGGGAAAATACCAGATGATTTTGGAAAGCTACAAAAGTTAACAGGCTTGAGTTTGTCACTGAATAAGTTATCAGGGGAGATACCAGAAAGTTTAGGCCTTCTTCCATCTCTGATCGATTTTCGCGTCTTTTTCAACAATTTATCAGGTACTCTTCCTCCTGACTTCGGTCGCTCCTCAAATCTAGGATCCTTTGACATTGCTTCCAATAATTTATCAGGAAAGTTACCAGAGAACTTATGCTATTATGGAGAGTTACTTAAGTTAACTGCTTATGACAATAATCTCAGTGGTGAGTTGCCAGAATCATTAGGAAACTGTAGTAGCCTGCTTGACTTAAAACTCGATAATAATCGGTTTTCTGGTGCCATTCCTAGTGGTCTTTGGACATCTTTCAGTTTGATGAATTTTATGGTAAGCCACAACAAGTTCACTGGTGTGCTTCCTGAAAGGTTGTCATCAAATATTTCGCGCTTTGAGATTAGTTATAATAACTTTTTCGGTAGAATTCCTGCTGGAGTATCCTCCTGGACAGGTGTAGTAGTTTTTGATGCCAGCAAGAACTTCTTCAATGGAAGTATTCCACAAGAGTTAACAATTCTTCCCAAATTAACCACTCTTTTGCTTGACCAGAACCAGCTCATAGGGCCACTTCCATCAGAAATAGTATCATGGAAGTCTCTAGTAACTCTAAATTTAAGCCGGAACCAACTCTCCGGACAAATCCCTGATGCAATTGGCCAGTTACATGTCCTTAATCTGCTTGACTTATCAGAAAATGAATTCTCTGGCCAAGTACCTTCAAGATTTCGAAGACTCACCAATCTCAACCTATCTTCCAATAACTTGACAGGGAAGGTTCCAAGTGAGTTTGAAAATTCGGCATATGCGAGTAGCTTTTTGGACAATCCTGGCCTTTGTGCTGATACACAAGCACTGAACCTTACCCCGTGTAATTCTAGCACTCCCGAAAGTTCAAGCAAGGACTCATCTCGGTCTCTAGCTTTGATTATAAGCCTTGTGGTAGTAGCCTTCTTACTGATTTGTTCGATGTCATTCTTGATTATCAGACTATGCAGAAAAAGAAAGCAAGGACTTGATAACTCATGGAAGCTCATTTCCTTTCAGAGGCTGAATTTCACTGAATCAAACATAGTGTCTTCAATGACAGAACATAATATCATTGGAAGTGGTGGATATGGTACAGTATACCGCGTCGCTGTTGATGGTTTAGGCTACGTCGCTGTGAAAAAGATTATGAATAACAAAAAGTTAGAGAAGAAACTAGAGAGCTCTTTTCATGCTGAAGTTAAAGTATTGAGCAATATTCGTCATAACAACATTGTAAAGTTGTTGTGCTGTATCTCCAATGAGGAGTCTATGCTGCTTGTATACGAGTATCTCGAGAATCGTAGCCTAGATAGGTGGCTGTACAAGAAGAGTAAGTCAACATCAAATGTTTCGGGTTCAGTCAATCATTTTGTCCTTGATTGGCGAAAGAGATTGCGAATAGCCATCGGAGTTGCTCAAGGTTTGAGCTACATGCACCATGATTGCTCAACACCTATTGTTCATAGAGATGTGAAAACAAGCAACATCATTTTGGATTCTCAGTTCAATGCAAAAGTTGCTGATTTTGGTCTGGCTAGGATGTTGATCAAGCCTGGTGAACTTGAGACCATGTCAAATGTGGTTGGCTCATTTGGTTATATTGCTCCAGAATATGTTCAAACTACAAGAGTCAGTGAAAAGATTGATGTATTCAGCTTTGGTGTTATCCTATTGGAACTAACAACTGGTAAAAAAGCTAATAAAGGAGATGAACATTCATCTCTTGCAGAATGGGCATTGCACCAAGTTCAAGTAGGAAGCAACATAGAAGAGCTTCTAGACAAAGAAGTAAAGGAACCAAGTTACTTAGATGAAATGTGTAATGTTTTCAAACTTGGTATAATGTGTACTTCAACATTTCCATCTAATAGACCTTCCATGAAGGAGGCTTTGCAAGTATTACTTAGGTGTGGAGAATCATTATCAAATGGAGAGAGGAATATTTGTCACTATGATGTTGTTCCTCTTCTTAGAGATTCAAAGAGGGAGTGTAGGTTGGATGTTGAAAATGATAGCTAG 3039 0.3873 MTTLNQTCLKSPFYSLLAFFIIISNANSQSQLYDQEHAVLLKIKQYLKNPSFLSHWISSNSSHCSWPEITCINGSITGLALVNTDINQTIPTSLCDLTNLTHVDFNLNYIPGEFPIYLYNCSKLQYLDLSMNNFVGKIPDDIDSLSNLQYLNLSYTNFTGDIPSSIGRLKELRHLPLQYCLFNGTYPDEIGNLSNLETLDLSSNYELPSSKLPLSWTKLNKLKVFYMYGCNLVGEIPENIGEMAALEKLDISQNSLTGHIPSGLFMLKNLSILYLFQNILSGEIPGVVEAFNLTIVDLTNNDLTGKIPDDFGKLQKLTGLSLSLNKLSGEIPESLGLLPSLIDFRVFFNNLSGTLPPDFGRSSNLGSFDIASNNLSGKLPENLCYYGELLKLTAYDNNLSGELPESLGNCSSLLDLKLDNNRFSGAIPSGLWTSFSLMNFMVSHNKFTGVLPERLSSNISRFEISYNNFFGRIPAGVSSWTGVVVFDASKNFFNGSIPQELTILPKLTTLLLDQNQLIGPLPSEIVSWKSLVTLNLSRNQLSGQIPDAIGQLHVLNLLDLSENEFSGQVPSRFRRLTNLNLSSNNLTGKVPSEFENSAYASSFLDNPGLCADTQALNLTPCNSSTPESSSKDSSRSLALIISLVVVAFLLICSMSFLIIRLCRKRKQGLDNSWKLISFQRLNFTESNIVSSMTEHNIIGSGGYGTVYRVAVDGLGYVAVKKIMNNKKLEKKLESSFHAEVKVLSNIRHNNIVKLLCCISNEESMLLVYEYLENRSLDRWLYKKSKSTSNVSGSVNHFVLDWRKRLRIAIGVAQGLSYMHHDCSTPIVHRDVKTSNIILDSQFNAKVADFGLARMLIKPGELETMSNVVGSFGYIAPEYVQTTRVSEKIDVFSFGVILLELTTGKKANKGDEHSSLAEWALHQVQVGSNIEELLDKEVKEPSYLDEMCNVFKLGIMCTSTFPSNRPSMKEALQVLLRCGESLSNGERNICHYDVVPLLRDSKRECRLDVENDS* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0285 1012 SMART LRR_typ_2 529 552 IPR003591 -
Lan3g0285 1012 SMART LRR_typ_2 314 338 IPR003591 -
Lan3g0285 1012 SMART LRR_typ_2 243 267 IPR003591 -
Lan3g0285 1012 SMART LRR_typ_2 573 596 IPR003591 -
Lan3g0285 1012 SMART LRR_typ_2 504 528 IPR003591 -
Lan3g0285 1012 SMART LRR_typ_2 145 169 IPR003591 -
Lan3g0285 1012 Gene3D Ribonuclease Inhibitor 342 624 IPR032675 -
Lan3g0285 1012 SUPERFAMILY Protein kinase-like (PK-like) 686 974 IPR011009 -
Lan3g0285 1012 Pfam Leucine rich repeat N-terminal domain 35 71 IPR013210 -
Lan3g0285 1012 Pfam Protein kinase domain 694 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0285 1012 Pfam Leucine rich repeat 123 181 IPR001611 GO:0005515
Lan3g0285 1012 Gene3D Transferase(Phosphotransferase) domain 1 771 991 - -
Lan3g0285 1012 ProSitePatterns Protein kinases ATP-binding region signature. 698 721 IPR017441 GO:0005524
Lan3g0285 1012 SMART serkin_6 692 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0285 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672|GO:0006468
Lan3g0285 1012 CDD STKc_IRAK 698 976 - -
Lan3g0285 1012 Pfam Leucine Rich Repeat 575 596 IPR001611 GO:0005515
Lan3g0285 1012 Pfam Leucine Rich Repeat 292 314 IPR001611 GO:0005515
Lan3g0285 1012 SUPERFAMILY L domain-like 42 376 - -
Lan3g0285 1012 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 14 1005 - -
Lan3g0285 1012 Gene3D Ribonuclease Inhibitor 208 341 IPR032675 -
Lan3g0285 1012 Gene3D Ribonuclease Inhibitor 33 207 IPR032675 -
Lan3g0285 1012 ProSiteProfiles Protein kinase domain profile. 692 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0285 1012 Gene3D Phosphorylase Kinase; domain 1 669 770 - -
Lan3g0285 1012 SUPERFAMILY RNI-like 291 593 - -
Lan3g0285 1012 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 14 1005 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0285 Lan-Chr3 1911068 1915461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0285 30 1002 Receptor kinase-like Gene Family AT5G25930 50.152 0.0 925
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan3g0285 Pkinase 3.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0285 - - gmx:100798963 1426.38