Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0279 ATGGGAGAAGAGGTGAAGAACTATAGCCACGAAACCGAACGGGTGACGGAGTGGGAGATAGGTCTTCCCACCGCCGATGACCTCACACCACTCTCTCAGCCGTTGATTCCGCCGGAACTCGCATCTGCTTTCAGTATCTCACCGGAGCCTTACCGGACACTCATCGACGTCAATCGCGCCTCCAACGACACCATCGCCGCCCTCCGCAGCGGTGCCGGTGGAGGCTCTCAGACGTTATCCGCGGTCATCGAACCAGATGAGGAAGAAGAAGAGGAGGAAGAACCGGATCGGGAAAACGGTTCGGGTACTGAATGTAAAAAGCTCCGTAGACTCGATTCTGCGGAAGATGCGGATTCGAATATGCAGAATAATAACAACGATGATGCATCGGGTAGGTCAGTGAAACGACCGCGTTTAGTGTGGACACCGCAATTACACAAACGATTCGTTGACGTTGTAGCGCACCTAGGGATCAAAAACGCGGTTCCGAAAACGATTATGCAGTTGATGAACGTTGAAGGTTTGACACGTGAAAACGTAGCGAGTCATCTTCAGAAATATCGACTTTACCTTAAGAGAATGCAAGGGCTTTCGAACGAAGGTCCTTCTTCTTCAGATCAGCTTTTCGCTTCCACGCCGGTGCCTCAGAGCTTGCACGACTCCGGCGGCGGTGGCGGCGGTGGTCATTCTCATCATGCTCCAGTTCCGATGCCGTATCCTCCGCCGCATATGATGGCGATGCTTGGAATGCCTCATCACGGATTCAATAACGGTGGATTTCAGCAGAGGGATTGGTCTTCGGGGTTTTCATACCCTCACCATGCTCATGGTCATGGCATTACTCCTAGTGGTGATAAATGA 861 0.5215 MGEEVKNYSHETERVTEWEIGLPTADDLTPLSQPLIPPELASAFSISPEPYRTLIDVNRASNDTIAALRSGAGGGSQTLSAVIEPDEEEEEEEEPDRENGSGTECKKLRRLDSAEDADSNMQNNNNDDASGRSVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHDSGGGGGGGHSHHAPVPMPYPPPHMMAMLGMPHHGFNNGGFQQRDWSSGFSYPHHAHGHGITPSGDK* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0279 286 MobiDBLite consensus disorder prediction 197 218 - -
Lan3g0279 286 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 9 277 - -
Lan3g0279 286 SUPERFAMILY Homeodomain-like 134 193 IPR009057 -
Lan3g0279 286 Pfam Myb-like DNA-binding domain 140 188 IPR001005 -
Lan3g0279 286 MobiDBLite consensus disorder prediction 266 286 - -
Lan3g0279 286 Gene3D - 133 195 - -
Lan3g0279 286 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 137 189 IPR006447 GO:0003677
Lan3g0279 286 MobiDBLite consensus disorder prediction 99 116 - -
Lan3g0279 286 MobiDBLite consensus disorder prediction 83 98 - -
Lan3g0279 286 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 9 277 IPR044841 GO:0003700|GO:0006355
Lan3g0279 286 MobiDBLite consensus disorder prediction 197 238 - -
Lan3g0279 286 MobiDBLite consensus disorder prediction 68 135 - -
Lan3g0279 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 192 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0279 Lan-Chr3 1861814 1865157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0279 1 279 G2-like Transcription Factor Family AT3G46640 52.159 4.01e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan3g0279 Myb_DNA-binding 1.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0279 - - aprc:113858844 324.324