Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0273 ATGAAGAATTCTGATTCTAATGATTATGATGATTATGTTTATAATATGGCAGATCAAAATCATCCCCCCTCTTCAAGCATGGTGATTGATGCTGTTGCAGGTTCTTCTTCTTCATCTTCATATCATCGTAGCCATCCACGAAAGAAACGCACCACCATGATGACAATGCTCCATGACAACAACAACAACAATAATAGCAACAACAATAACAACATTGTCAAAACAAACAAGTATGGTGGTGGTGGTGTTGGAAAGAAACAAGCAGATACAGGAGCACCTAAGATTACACCACCTTGTACCGAGTGTGGTAAAAAGTTCTGGTCTTGGAAGGCTTTGTTTGGTCACATGCGATGCCACCCTGAGCGACAATGGCGCGGCATTAATCCTCCTCCGAACATCACGCCGCGACAACCTCAGATACTGACTGATGAGGATCATGAGGTTGCTGCTTCTCTACTATTGCTTGCAAAGGGAAAGGGTAAGGTTGTGGTTAAAGAAGATAGTACTATGGTTAATATGAATTATGGGATTCTGTCACCGAACTTGAGTCTAGTTTCAAGCCAAGACGAGCGATTTGTATGCTCCAGTTGCAATAAAGTATTTGGATCACACCAGGCTCTAGGAGGACATCGGGCTAGTCATAAGAACGTTAAGGGTTGTTTCGCAATCAATGTTGGTGAGGATCATATGAATATTATTCATAATAATCATAGTCATAGTCATATCGGAGGAGGTGCTACAAGTAACAACGATAATGATCAACAGCAACAACAACAACATCAACAACATATGGATGGAGAGGGACACAAATGTAGCATTTGTCTGAGGGTGTTCTCAACAGGACAAGCATTGGGTGGCCATAAGAGATGTCATTGGGAAAACAAACCAACAACAAATAATGTTCTTGCTCTTCCTCTTGACTTGAATTTCCCTCCTCAGGAACAAGAACAACCACCACTCAATTTGGATTTGAGTGTCTGTTTCTGCATCAGAGGGCGCAAGAGTAAGGAAAATAATGAGGAAGATTCAGAGAAACTCTCCAATGCCAAGGCTCCACACAAGGGAAAAGTTAAAGGGTGTTGTTCAAAAACTCCTTGTGATGATGGTGTTGGTGGCAATGTTGTGCATGGAAGCAGCACAATAGCTAGCAATGATGCAGCAGTGGCTGCTGCTGTGGTGAGTGCAGCACATTTGTCTGTGATGAGTGTGAATGAAGGCCAAGATGGAAGTGGCCATGGCCATGGTTATGGTGGTGAATCTGGGGGAAATGATGGTGGCTAA 1281 0.4286 MKNSDSNDYDDYVYNMADQNHPPSSSMVIDAVAGSSSSSSYHRSHPRKKRTTMMTMLHDNNNNNNSNNNNNIVKTNKYGGGGVGKKQADTGAPKITPPCTECGKKFWSWKALFGHMRCHPERQWRGINPPPNITPRQPQILTDEDHEVAASLLLLAKGKGKVVVKEDSTMVNMNYGILSPNLSLVSSQDERFVCSSCNKVFGSHQALGGHRASHKNVKGCFAINVGEDHMNIIHNNHSHSHIGGGATSNNDNDQQQQQQHQQHMDGEGHKCSICLRVFSTGQALGGHKRCHWENKPTTNNVLALPLDLNFPPQEQEQPPLNLDLSVCFCIRGRKSKENNEEDSEKLSNAKAPHKGKVKGCCSKTPCDDGVGGNVVHGSSTIASNDAAVAAAVVSAAHLSVMSVNEGQDGSGHGHGYGGESGGNDGG* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0273 426 SMART c2h2final6 192 214 IPR013087 -
Lan3g0273 426 SMART c2h2final6 269 291 IPR013087 -
Lan3g0273 426 SMART c2h2final6 97 119 IPR013087 -
Lan3g0273 426 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
Lan3g0273 426 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 26 317 - -
Lan3g0273 426 ProSiteProfiles Zinc finger C2H2 type domain profile. 192 219 IPR013087 -
Lan3g0273 426 ProSitePatterns Zinc finger C2H2 type domain signature. 194 214 IPR013087 -
Lan3g0273 426 ProSitePatterns Zinc finger C2H2 type domain signature. 271 291 IPR013087 -
Lan3g0273 426 Gene3D Classic Zinc Finger 96 214 - -
Lan3g0273 426 Pfam C2H2-type zinc finger 99 121 - -
Lan3g0273 426 Pfam C2H2-type zinc finger 191 215 - -
Lan3g0273 426 Pfam C2H2-type zinc finger 269 293 - -
Lan3g0273 426 MobiDBLite consensus disorder prediction 403 426 - -
Lan3g0273 426 SUPERFAMILY beta-beta-alpha zinc fingers 267 298 IPR036236 -
Lan3g0273 426 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 124 IPR013087 -
Lan3g0273 426 MobiDBLite consensus disorder prediction 236 262 - -
Lan3g0273 426 SUPERFAMILY beta-beta-alpha zinc fingers 98 214 IPR036236 -
Lan3g0273 426 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 26 317 - -
Lan3g0273 426 MobiDBLite consensus disorder prediction 235 265 - -
Lan3g0273 426 ProSiteProfiles Zinc finger C2H2 type domain profile. 269 296 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0273 Lan-Chr3 1833595 1848349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0273 86 316 C2H2 Transcription Factor Family AT4G35280 49.593 7.26e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan3g0273 zf-C2H2_6 1.9e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0273 - - lang:109342958 726.472