Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0249 ATGTATAAGGATAAATATATGGGCCACGGTGGGGGTTTCCCGCCTCCATCGGGATGTTTTTCGGGTTACTCGCCAACTGAAAGTGTTGCCTTTAATGTGAAATCTGAACCAGCATCTTCATCATCGTCGTTTCCTCCACCGGTTGTTCCAGGTACTGGTGCAGATTCTAGTCGTTTTGGACATGGAATGTCCACGGAGTCGAGTGGGTTTAGTCATGATATCAGCAGAATGTTTGATAATCCCATGAAAAATAGAGGCCATAGACGTGCTCATTCGGAGATCCTCACATTACCTGATGATATTAGCTTCGACAGCGACCTTGGTGTAGTTGGAGGTGCTGATGGGCCCTCATTCTCTGATGACACCGAGGAAGATTTACTGTCGATGTATCTTGATATGGATAAGGTCAATTCGACTTCTGCTGCTACATCGACATTTCAATTCAGTGAGCCATCTAATGCGGCAGCCGCATCAGGTTCAGGGCCAACATCAGCACCTGCATCAGGAGCACAAACCTTCTCTGCAGAGAACATAGTTACTGGTACCAATGAAAGGCCCAGAATTAGACACCAGCATAGCCAATCCATGGATGGATCAACGACCATTAAACCTGAGATGCTAGTATCAGGTTCTTCGGATGACATATCTGCAGTCGATTCCAAAAAAGCAATGTCAGCTGCCAAGCTTGCAGAACTTGCCTTAATCGACCCCAAGCGTGCCAAAAGGATATGGGCAAATAGGCAGTCTGCGGCAAGGTCAAAAGAGAGGAAGATGCGCTACATTGGTGAGCTTGAAAGAAAGGTTCAGACGTTACAAACGGAAGCAACTTCTTTGTCTGCACAATTAACTCTCTTGCAGAGAGATACAAATGGGCTGAATTCTGAGAACAGTGAGCTGAAGCTGCGGTTGCAAACCATGGAGCAACAAGTTCGCTTGCAAGATGCATTAAATGATGCATTGAAAGAGGAGATTCAACATTTGAAAATACTGACTGGGCAAGCTATGCCTAATGGAGGACTCATGACAAAGTTTGCTTCTTTTGGAGGGAGCCAGCAATTCTATCCGAATAATAATCATTCCATGCATACTCTTTTAGCTGCACAACAGTTTCAACAGCTCCACATTCATCCTCAGAAGCAGCAGCAGCAACAACAACGGCAGCAGCATCAATTTCAGCACCATCAGCAACAGCAACAAATGCTTCAACAGCAACAACAGGAACAACAGCATCGACAATCAGGTGACTTGAAAATGAGAGCAGCTACGCCACCTCCATGTCCGAGAGATAATACTTCTCCTGATGCAAATCCTTCAGCTTCCAACAATTGTTGA 1332 0.4542 MYKDKYMGHGGGFPPPSGCFSGYSPTESVAFNVKSEPASSSSSFPPPVVPGTGADSSRFGHGMSTESSGFSHDISRMFDNPMKNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDDTEEDLLSMYLDMDKVNSTSAATSTFQFSEPSNAAAASGSGPTSAPASGAQTFSAENIVTGTNERPRIRHQHSQSMDGSTTIKPEMLVSGSSDDISAVDSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIGELERKVQTLQTEATSLSAQLTLLQRDTNGLNSENSELKLRLQTMEQQVRLQDALNDALKEEIQHLKILTGQAMPNGGLMTKFASFGGSQQFYPNNNHSMHTLLAAQQFQQLHIHPQKQQQQQQRQQHQFQHHQQQQQMLQQQQQEQQHRQSGDLKMRAATPPPCPRDNTSPDANPSASNNC* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0249 443 MobiDBLite consensus disorder prediction 58 73 - -
Lan3g0249 443 MobiDBLite consensus disorder prediction 152 173 - -
Lan3g0249 443 Pfam bZIP transcription factor 238 296 IPR004827 GO:0003700|GO:0006355
Lan3g0249 443 Gene3D - 237 290 - -
Lan3g0249 443 SMART brlzneu 234 298 IPR004827 GO:0003700|GO:0006355
Lan3g0249 443 MobiDBLite consensus disorder prediction 373 443 - -
Lan3g0249 443 MobiDBLite consensus disorder prediction 373 411 - -
Lan3g0249 443 Coils Coil 254 323 - -
Lan3g0249 443 SUPERFAMILY Leucine zipper domain 238 289 IPR046347 GO:0003700|GO:0006355
Lan3g0249 443 CDD bZIP_plant_RF2 239 288 IPR044759 GO:0003700|GO:0006355
Lan3g0249 443 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 236 299 IPR004827 GO:0003700|GO:0006355
Lan3g0249 443 MobiDBLite consensus disorder prediction 34 73 - -
Lan3g0249 443 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 434 - -
Lan3g0249 443 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0249 Lan-Chr3 1616618 1620690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0249 20 367 bZIP Transcription Factor Family AT1G06070 68.466 8.86e-154 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan3g0249 bZIP_1 4.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0249 - - gmx:100786738 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2166 6 32088984 32096573 Lan3g0249 3 1616618 1620690 LSH
Lan10g0312 10 2057823 2061248 Lan3g0249 3 1616618 1620690 LSH
Lan3g0249 3 1616618 1620690 Lan8g1768 8 24338510 24343178 PCT
Lan3g0249 3 1616618 1620690 Lan13g0276 13 1760312 1764738 PCT
Lan8g1768 8 24338510 24343178 Lan3g0249 3 1616618 1620690 PCT
Lan13g0276 13 1760312 1764738 Lan3g0249 3 1616618 1620690 PCT