Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0240 ATGATTAGGAACCGTTGGAATTTGAAGGAAAAAAATCAGATTTTGATTCTGAATAGTTTGTGGGTTTCGTTGGGATTCAATTGGGCTTTTGACAAAGTGGCGAAAATGGACTTGGATGCTGCCGAGGAAGAATCGGCACCAGAGGTTCATGTACCTGCTGAAATTGATTGGAAAATGCTTGATAAATCCAAGTTTTTCTTCCTTGGTGCAGCACTTTTCTCTGGTGTTTCAGCAACATTGTACCCTGCTGTTGTTTTAAAAACCCGACAGCAAGTAGCTCAGTGCCACGTTTCTTGCATCAAGACTGCATTTTCTGTGATTAGGGGTGAGGGTTTTCGAGCATTGTATAGAGGATTTGGGACCTCTTTGATGGGTACGATCCCTGCTAGAGCTTTATATATGGCTACTCTAGAGGTTACAAAGAGTAATGTAGGTACTACTGCTACTGTTAGGTTAGGCCTGGCCGAACCAACTGCTGCCACAATTGCAAATGCAGCTGCAGGGTTGAGTGCAGCCATGGCGGCTCAACTTGTTTGGACCCCAGTCGATGTTGTTAGCCAGAGATTGATGGTTCAAGGTGGACCTGATTCGCCACGTCAATATACGAATGGGATTGACGCCTTCAGAAAGATTCTTAGGAATGATGGTCCAAGGGGATTGTATAGAGGTTTTGGGATATCAATTCTGACCTATGCGCCTTCAAATGCGGTTTGGTGGGCTTCATATTCTGTTACACAAAGGCTTGTTTGGGGTGGAGTTGGATACTACTTATGCAAGAAAGATGTGGATGATAGGAGCGAGACTACTAGTGCAGGTAACGAAATGAGACCGGATTGGAAAACTGTGATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCAGGTGGCATGTCTGCTTTAATCACCATGCCGTTAGATACGATCAAGACAAGACTGCAGGTCTTGGACGGCGATGAGAATGGTCGTCGAGGACCAACAGTTATGCAGACAGTGAGAAATTTGGTTAAGGAAGGTGGTTGGATGGCATGTTATAGAGGGCTGGGACCAAGATGGGCTTCAATGTCAATGTCTGCAACAACAATGATCACTACATATGAGTTCCTAAAACGACTTTCCACGAAGAATCAAGAGGTTTTGACATGA 1140 0.4491 MIRNRWNLKEKNQILILNSLWVSLGFNWAFDKVAKMDLDAAEEESAPEVHVPAEIDWKMLDKSKFFFLGAALFSGVSATLYPAVVLKTRQQVAQCHVSCIKTAFSVIRGEGFRALYRGFGTSLMGTIPARALYMATLEVTKSNVGTTATVRLGLAEPTAATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQGGPDSPRQYTNGIDAFRKILRNDGPRGLYRGFGISILTYAPSNAVWWASYSVTQRLVWGGVGYYLCKKDVDDRSETTSAGNEMRPDWKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRNLVKEGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSTKNQEVLT* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0240 379 Gene3D Mitochondrial carrier domain 63 377 IPR023395 -
Lan3g0240 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 281 370 IPR018108 -
Lan3g0240 379 Pfam Mitochondrial carrier protein 285 374 IPR018108 -
Lan3g0240 379 Pfam Mitochondrial carrier protein 161 249 IPR018108 -
Lan3g0240 379 Pfam Mitochondrial carrier protein 72 143 IPR018108 -
Lan3g0240 379 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 36 376 - -
Lan3g0240 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 159 248 IPR018108 -
Lan3g0240 379 PRINTS Mitochondrial carrier protein signature 66 79 IPR002067 GO:0055085
Lan3g0240 379 PRINTS Mitochondrial carrier protein signature 118 138 IPR002067 GO:0055085
Lan3g0240 379 PRINTS Mitochondrial carrier protein signature 221 239 IPR002067 GO:0055085
Lan3g0240 379 PRINTS Mitochondrial carrier protein signature 290 312 IPR002067 GO:0055085
Lan3g0240 379 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 36 376 - -
Lan3g0240 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 61 143 IPR018108 -
Lan3g0240 379 SUPERFAMILY Mitochondrial carrier 58 367 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0240 Lan-Chr3 1564292 1566294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0240 36 376 Chloroplast and Mitochondria Gene Families AT1G72820 74.138 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0240 K15121 - gmx:100784616 511.531