Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0238 ATGGCTTCAATTAAAGAAGTGTCAACCGTGATTGCCATTGATAAAGACAAGAACAGCAAATATGCAGTAAAATGGGCTGTTGATAATCTTTTGATGAAGAATACCTCTTGCACCCTAATTCATGTTATTAGAACCAAAGCCTTGCATCCCCGTAATGTTGAAAATGCCTCTAAACAAGGTCGTCCACCAACCAACGAAGAATTGCACCAATTCTTTCTTCCCTTCAGAGGATTTTGTGCTCGAAAAGGGATTGTAGCAAAGGAGTTGGTGCTACATGACATTGATGTTCCTAGTGCACTCACTGAGTACATCATTGAAAACAATATCAGGAGTATTGTTGTTGGTGCTCCCAACTGGAATGTTTTTAGAAGGATATTTAATGATGCAGATGTGCCATCTAGCTTAGTCAGAAAATCTTACAAAAATGGGATTTTGCGACAATCAAGTGATGTAATATATTTTGGTCAAAACAACAATGCTATACAGCAAGGAAAAGCATATATATCCAGTGAAGAGAGTAATCCACCAACACTATCAGATGAAAACAATTTATCAAAACTAATTGATGGTTCTAAGTTGAATGAGAACCAAGATGCAGTTAGGAACTCAAATAGTTCTTCTAGCACCAATTCTTCTTCAAAGTCCCCAAGAACCTTGGAGACAGAAATAAATAAGTTGAAACTGGAACTAAAGAAAACAACAGAAGAGTATACTAAAGCTTGCAGAGAAGCTGTTATGGCAAAAGTGAAGGCAATGGATCTTGAAAAGTTTATGTTCGAAGAAGAACAGAACATCGAAAAAGCTAGGCTTGGTGAAGAGGCTGCATTGGCTTTGGCAGAAGTAGAGAAGCAGAAAACCAAAGCAGCAATTGAATCAGCTGAAATGTCGCGATGCCTCGCAGCAATAGAGATCAAGAAGAGAAAGCAGACCGAAAAAAGAGCCATGCAAAAGGAAGAAGAGAAGCAAATAGCATTAAATACTAATCAACCTGATAATATTCTTTGCAAAAGATACAATATTAAAGAAATTGAAGATGCAACAAATTGCTTTGACAAAGCTCTGAAACTTGGTGAAGGAGGATATGGACCTGTTTTTAAAGGGTTGCTTGATAACACTGTTGTTGCCATTAAGGCCTTGAGATCAAACATAACACAAGGTGATAGACAATTTCAACAAGAGGTTGACGTTTTGACGACAGTAAGACATCCGAACATGGTTCTACTTCTAGGTGTCTGCCCGGAGAACGGATGCCTTGTATATGAGTTCACCGAAAATGGCACCTTAGAAGATCGTCTCTTCCAGAAGGATAACACTCCACCACTACCATGGAACCTAAGATTCAAAATAGCATCAGAAATTGCCACTGGCCTTCTTTTCCTTCACCAGACAAAGCCTGAGCCAATTGTACATCGCGATCTCAAGCCATCAAACATTCTATTAACTAAGAACTATGTAACCAAGATCGCGGACGTGGGTTTGGCCAGACTAGTCCCCCCGAGTGCTGCTGACAAAACCACTCAGTATCACATGACTGCTACAGCAGGCACATTTTTCTACATTGACCCGGAATATCAACAAACAGGGTTGTTGGGTGTGAAATCAGATATATATTCATTAGGTGTAGTTTTGCTACAAATTATTACCGGAAAGGGTCCTATGGGCGTGGCTCGATTGGTGGAGGAAGCGATACATGAAGGTAAATTTGAAGAGGTGCTTGATCCAAATGTGAAAGATTGGCCTGTTGAAGAGACTTTGTCATTAGCTAGCTTGGCTTTGAAGTGTTGTGAGATGAGAAAAAGGGATAGGCCTGATCTTGGTTCTGTCATTTTGCCTGAGCTGAATCGACTAAGCGATCTCGGAGGAGTCCTTGACACTGATATTGTAACAGCTAGCAGGTTAGTTAACATTTCAACTTCACTGAATTTTAATGATCTTGTTTTGTAA 1944 0.3971 MASIKEVSTVIAIDKDKNSKYAVKWAVDNLLMKNTSCTLIHVIRTKALHPRNVENASKQGRPPTNEELHQFFLPFRGFCARKGIVAKELVLHDIDVPSALTEYIIENNIRSIVVGAPNWNVFRRIFNDADVPSSLVRKSYKNGILRQSSDVIYFGQNNNAIQQGKAYISSEESNPPTLSDENNLSKLIDGSKLNENQDAVRNSNSSSSTNSSSKSPRTLETEINKLKLELKKTTEEYTKACREAVMAKVKAMDLEKFMFEEEQNIEKARLGEEAALALAEVEKQKTKAAIESAEMSRCLAAIEIKKRKQTEKRAMQKEEEKQIALNTNQPDNILCKRYNIKEIEDATNCFDKALKLGEGGYGPVFKGLLDNTVVAIKALRSNITQGDRQFQQEVDVLTTVRHPNMVLLLGVCPENGCLVYEFTENGTLEDRLFQKDNTPPLPWNLRFKIASEIATGLLFLHQTKPEPIVHRDLKPSNILLTKNYVTKIADVGLARLVPPSAADKTTQYHMTATAGTFFYIDPEYQQTGLLGVKSDIYSLGVVLLQIITGKGPMGVARLVEEAIHEGKFEEVLDPNVKDWPVEETLSLASLALKCCEMRKRDRPDLGSVILPELNRLSDLGGVLDTDIVTASRLVNISTSLNFNDLVL* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0238 647 PANTHER OS02G0152300 PROTEIN 8 138 - -
Lan3g0238 647 PANTHER OS02G0152300 PROTEIN 173 624 - -
Lan3g0238 647 Coils Coil 223 243 - -
Lan3g0238 647 Gene3D HUPs 8 140 IPR014729 -
Lan3g0238 647 Pfam Universal stress protein family 10 139 IPR006016 -
Lan3g0238 647 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 10 131 - -
Lan3g0238 647 SUPERFAMILY Protein kinase-like (PK-like) 331 608 IPR011009 -
Lan3g0238 647 SMART serkin_6 350 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0238 647 Gene3D Phosphorylase Kinase; domain 1 327 422 - -
Lan3g0238 647 ProSiteProfiles Protein kinase domain profile. 350 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0238 647 Pfam Protein kinase domain 353 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0238 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Lan3g0238 647 Coils Coil 276 296 - -
Lan3g0238 647 CDD STK_N 8 138 - -
Lan3g0238 647 MobiDBLite consensus disorder prediction 195 218 - -
Lan3g0238 647 Gene3D Transferase(Phosphotransferase) domain 1 423 620 - -
Lan3g0238 647 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 173 624 - -
Lan3g0238 647 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 8 138 - -
Lan3g0238 647 Coils Coil 301 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0238 Lan-Chr3 1554406 1559047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0238 5 620 Receptor kinase-like Gene Family AT5G35380 44.524 1.46e-173 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lan3g0238 Pkinase 8.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0238 - - gmx:100802306 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0638 5 13809037 13822577 Lan3g0238 3 1554406 1559047 PCT