Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0232 ATGGGTGCTTCAGGAAGATGGTTTAAATCACTCCTCTCTCATAGAAAAACCTCAACAACAACTGATCAAGATAGTGATATTCATAATAAGAGTAATAATAATAATAAGAAGTGGAAGCTTTGGAAGAGTTCTTCAGAAGGGTCTTCTTCTATGTGTGTGAAGAAATGTGGTGTTGGTGTTTCTGACAAGTGTTGTGAATCTTCTTTGTATAATGCTGCTGTGGCTGCAGTGGTTAGAGCTCCACCAAAAGATTTCATGATCATCAAGAAGGAATGGGCTGCAATTCGCATTCAATCTGTGTTTAGAGCATTCTTGGCTAGGCGAGCTTTAAGGGCGTTGAGGGCAGTGGTAAGGCTGCAAGCTATATTTCGAGGGCGGCTAGTTAGAAAGCAAGCAGCTGTTACTCTAAGGTGTATGCAGGCTCTTGTTCGAGTTCAGGCACATGTCAGGGCAAGTAATGTGAGGAATTCTCCAGAAGGGAAAGCAGTGCAGAAATTATTGGATGCACATCGCAACCAGAACGATCCGGTTAAGCAGGCTGAGCAAAGATGGTGTGAAATTCCTGGAACTGTGGATGAAGTTAAAACAAAGCTAAGAATGAGGCAAGAAGGAGCCATTAAGAGGGATAGAGCAATGGCATACTCTCTCTCCACACAGCAACCAAGACTGTGTGCAAGTCCAAACTCAAGAGCCTCAAAGGCAGTGACTCCTCTCAGGCATCACAATCTAGACAATAAGAGCTTAGGATGTAGCTTGTTAGAACACTGGATGGCAACAAAGCCATGCGAGAGTCCAATCTCTAGGAGAAGTGAAGATCTTGTTCCGACTTTCCAATCAAGAATGAATGGTGTAACAAAAAGGATTTCAGTTAAATCTCTTACTCAATCGACTCCATCATCTTCGGCCGAAAGCTCTGAATGCATGTATGATGATAGCCCTGTATCAACTTCATGTACATCTGGATCACTACCATCTACTACAAATATGGTGGAAGCAATAGAAGAAAAAGATGTTCATAAACTAAGCTATATGAATTTGACAGAATCAACTAAGGCTAAACTGAAAGCTTGCAGGTCTTCTTCGAAGAATTCGAAGAGACTCAATATGGAGGATTCTATGTCTCATAGCTCAAAAACAACAACCTTTCTGAATGGAGATGCTAGAAGCAGCAATTCAGGTTCTGATCCTTCAGTTAATTTGTGGAAGGATCTTTCTGCAACACCTCTAAGGGTAAGTTATTATCAAAAAAGATATGTCGGGAGATAA 1266 0.4139 MGASGRWFKSLLSHRKTSTTTDQDSDIHNKSNNNNKKWKLWKSSSEGSSSMCVKKCGVGVSDKCCESSLYNAAVAAVVRAPPKDFMIIKKEWAAIRIQSVFRAFLARRALRALRAVVRLQAIFRGRLVRKQAAVTLRCMQALVRVQAHVRASNVRNSPEGKAVQKLLDAHRNQNDPVKQAEQRWCEIPGTVDEVKTKLRMRQEGAIKRDRAMAYSLSTQQPRLCASPNSRASKAVTPLRHHNLDNKSLGCSLLEHWMATKPCESPISRRSEDLVPTFQSRMNGVTKRISVKSLTQSTPSSSAESSECMYDDSPVSTSCTSGSLPSTTNMVEAIEEKDVHKLSYMNLTESTKAKLKACRSSSKNSKRLNMEDSMSHSSKTTTFLNGDARSSNSGSDPSVNLWKDLSATPLRVSYYQKRYVGR* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0232 421 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 418 - -
Lan3g0232 421 PANTHER IQ-DOMAIN 5-RELATED 1 418 - -
Lan3g0232 421 SMART iq_5 112 133 IPR000048 GO:0005515
Lan3g0232 421 SMART iq_5 89 111 IPR000048 GO:0005515
Lan3g0232 421 ProSiteProfiles IQ motif profile. 114 141 IPR000048 GO:0005515
Lan3g0232 421 Pfam IQ calmodulin-binding motif 92 111 IPR000048 GO:0005515
Lan3g0232 421 Pfam IQ calmodulin-binding motif 114 131 IPR000048 GO:0005515
Lan3g0232 421 MobiDBLite consensus disorder prediction 373 398 - -
Lan3g0232 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 132 IPR027417 -
Lan3g0232 421 ProSiteProfiles IQ motif profile. 90 118 IPR000048 GO:0005515
Lan3g0232 421 Gene3D - 88 141 - -
Lan3g0232 421 MobiDBLite consensus disorder prediction 359 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0232 Lan-Chr3 1510017 1512919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0232 1 404 IQD Protein Family AT1G72670 45.349 4.12e-92 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0232 - - gmx:100816492 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2146 6 31899725 31905252 Lan3g0232 3 1510017 1512919 LSH