Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0228 ATGGAATCTTCATCTTCCTGTGGTGTAACTCAAATCAAATATGATGTCTTCATTAGCTTTAGAGGCACAGATATACGCTACGGTTTTCTCAGCCATTTGAAAAAGGAACTAAGGCAGAAGCAAGTTGATGCTTTCGTAGATGATAGACTTGAGAGTGGTGATGAAATATCACCAGCACTTGTAAAAGCTATTGAACAATCACTTATTTCTTTGATCATATTCTCAAAAGACTATGCTTCTTCAAAGTGGTGCTTGGAAGAGCTTGTGAAAATAGTTGAGTGCATGGCAAGGAATAAACAAATTGTTGTTCCAGTTTTCTATAATGTTGATCCATCTCATGTACGCTATCAGAAAGGGACTTATGGTGATGCATTTGCTATACATGAGAAAAAGAAAAGGAACTTGTCTAAGTTGCAAAATTGGAGATCTGCTTTGAATATAGCTGCTAATCTTTCTGGATTTCATTCATCAAATTTTGGGGATGAAGTTGAGCTTATAGAAGAAGTTGTGAAATGTTTGTTGGCAAGGTTGAATCTTATGTACCAAAGTGAGTTAACAGACCTCGTTGGAATCGAAGAACGGATTGCAGATATAGAGTCACTATTGTTCCTGAAATCGACAATAGATGTTCGTGTGATTGGGATTTGGGGCATGGGGGGTATTGGTAAAACAACTATTGCAGCTGCAGTATTTAACCGTTTGTGTTTCGAGTATGAAGGGTGTTGCTTTATGGCAAACATAAGAGAAGAATCAGAGAAACATGGAACTATTTCTTTGAAGAATAAAATTCTGTCTATACTATTAAAGGAAAATGATCTATATATCGGTACGCCTAATGGAGTTCCTCCTTATGTAAAGAGACGGCTGCTTCGAAAAAAGGTTCTTGTTGTTCTTGATGATATTAATGACTCTGAGCAACTAGAGAATTTGGTTGGAGAACTCGATTGGTTCGGACCCGGTAGCAGAATCATTGTTACAACTAGAGATAAACAAGTGCTTGGTAAAAGAGTTGATAGCATCTATGAGGCTAAGGCATTAAATTTTGATGAAGCTGTTAAGCTTTTCATTATGAATGCCTTCAAACAAATTAGTTCTCTTGACATGGAGTGGATTGAGCTATCAAGAAGGGTGATTCAGTATGCTAATGGAAATCCATTAGCCTTAAAGGTTTTGGGCTCTTTTCTTTACGGTAAAACGAAAATAGAGTGGGAAAGTCAATTGCAAAAACTTAAGAAAATGCCTCATGCAAAAATTCAGAATGTTTTGAGATTGACTTATGATAAGTTGGATAGAGAAGAGAAGAACATATTTCTATATGTTGCATGTTTTCTGAAAGGATATGAATCACATCGAATAATAGTTCTGCTTGACGCTTGTGGTTTCTCGACAATTATTGGGCTAAAAGTCCTTCGAGACAAAGCCCTTGTAGTTGAAGCCAAGGGATCAGGAAGATCAATTGTATCAATGCATGATTTGATACAAGAAATGGGTTGGGAGATTGTTAGAGAAGAATCTATCGATGACCCCGGAAAACGCAGCCGGCTATGGGATCCTACTGATATTCATCAAGTATTGAAAAATAACTCAGGAACTAAAGCCATTAAAAGCATAACACTGAATGTGTCAAAAATTGGTGAACTTTGCTTAAGTCCTCAAGTTTTTTCTAGGATGCAACAATTGAAATTTCTTAATTTTTCGCAACCTTATGGCGATGAGCAAATCTTGTATCTTCCTCAAGGCCTTGAATCTTTGCCAAATGACCTAAGACTTTTTCATTGGATTAGTTATCCTTTGAAATCCTTGCCTATTACATTCTGTGCAGAAAATCTTGTTGAGCTCAACATGACTTGGAGCAGAGCCGAAAAACTTTGGGATGGAATCCAGAATCTTCAGCATTTAAAGAAAATTGACCTCAGTAATTCGAAACATTTGCTAGAGCTACCGGATTTTTCAAAGGCCACAAATCTTGAAGAAATAGAACTATTTGGTTGCAGAAATTTACTTAATGTTCATCCATCTATTTTATCACTTCACAAGCTTGTAAGATTAAACCTGTTTTTTTGCAAAGCACTCACTAGTCTTCGAAGCGATACTCATTTAAGGAACATGAAAGACTTCGGTGGTTGTTCAAGGCTCAAGGAGTTTTCACTGACTTCAGAGAACATGAAAGACTTGAACTTAAATTCAACTGCTATCAATGAATTGCCATCATCAATTGGGAGACTAAAAAAACTTGAAACTTTGGCACTTGATCACTGCAAAGGCCTAAACAATCTTCCAGACAAGGTTGCCGACCTTGGATCGCTACGTGTTCTCCGTATATATGGTTGCATACAACTTGACGCATCAAATCTGCATGTCTTATTTAATGGTTTAAGGTCTTTGGAAACACTACTGCTAGAAGAATGTCTTAACTTACATGAAATTCCAGACAACATAAGTCTCCTATGTTCATTGCATCATTTGTTACTCAAAGGAACAAATGTTGAGAGATTCCCTACAAGCATTAAGCATCTTACGAAACTAGAAAAACTCGACTTAAGTGGTTGCAAGAGGCTGCATTTTCTACCAGAACTTCCACTATCCATAAAAGAGTTATATGCCACTAATTGCTCATCTTTGGAGACTGTAATGTTCCCTTTGAGAACTACTGATCTAGTACATGCATATAAGTCATACACTACATTCCAAAATTGCGTAAAGCTAGATAAACATTCACTCAAAGCTATCGGAGTAAACGCGCTTGTCGACATAAAGAAATTGGCATATGAACATCTCTCAAATATTGGAACCAAGTACCTTGATGGTCCAGCTTATGTTATCTACCCAGGAAATCAAGTTCCAGAGTCGTTCCGGGACAGGACAACACAGGCTTCAGTAACCATTGATCTCTCTTCTGCTCCTTCATGTTCCAAGGTTATAGGTTTCATCTTCTGTGTCATTGTTGGTAAGTTTCCATCAAATGACAAGAACTTCATTGGATGTGACTGCTACCTAGAAACAGGTAATGGTGAAAGGGTTAGCCTTGGACACAAGATGAACAATGCATGGTCTAGTATACATGCTTGTGAATTTCTTTCTGATCATGTGTGCATGTGGTTCGACGAACAATGTTGTCTGCAAAACTGCGAGCGCCAAGACGAAAACATCGAAGAACTTGTGGCAAAGGTTACATTTGAGTATTTTGCTCAATCTGGTAGTAGTTGGGAAAAAGAGAATGATATTATGATAAAAGGGTGTGGAGTGTGTCCAATATATGACTCAGAATATCATGATTTCATCAAACAAATGGAGCTAGACTTGACACTGCAGAATGGAACACAATATCTGAAACAGAAATGCAAGGCATTCATATTTCCACCTCTACAAAGTGAAAACTGGAAGAGTGCAACACAAGGCTTGAAGGAAATATTGTTTCTATGA 3423 0.3742 MESSSSCGVTQIKYDVFISFRGTDIRYGFLSHLKKELRQKQVDAFVDDRLESGDEISPALVKAIEQSLISLIIFSKDYASSKWCLEELVKIVECMARNKQIVVPVFYNVDPSHVRYQKGTYGDAFAIHEKKKRNLSKLQNWRSALNIAANLSGFHSSNFGDEVELIEEVVKCLLARLNLMYQSELTDLVGIEERIADIESLLFLKSTIDVRVIGIWGMGGIGKTTIAAAVFNRLCFEYEGCCFMANIREESEKHGTISLKNKILSILLKENDLYIGTPNGVPPYVKRRLLRKKVLVVLDDINDSEQLENLVGELDWFGPGSRIIVTTRDKQVLGKRVDSIYEAKALNFDEAVKLFIMNAFKQISSLDMEWIELSRRVIQYANGNPLALKVLGSFLYGKTKIEWESQLQKLKKMPHAKIQNVLRLTYDKLDREEKNIFLYVACFLKGYESHRIIVLLDACGFSTIIGLKVLRDKALVVEAKGSGRSIVSMHDLIQEMGWEIVREESIDDPGKRSRLWDPTDIHQVLKNNSGTKAIKSITLNVSKIGELCLSPQVFSRMQQLKFLNFSQPYGDEQILYLPQGLESLPNDLRLFHWISYPLKSLPITFCAENLVELNMTWSRAEKLWDGIQNLQHLKKIDLSNSKHLLELPDFSKATNLEEIELFGCRNLLNVHPSILSLHKLVRLNLFFCKALTSLRSDTHLRNMKDFGGCSRLKEFSLTSENMKDLNLNSTAINELPSSIGRLKKLETLALDHCKGLNNLPDKVADLGSLRVLRIYGCIQLDASNLHVLFNGLRSLETLLLEECLNLHEIPDNISLLCSLHHLLLKGTNVERFPTSIKHLTKLEKLDLSGCKRLHFLPELPLSIKELYATNCSSLETVMFPLRTTDLVHAYKSYTTFQNCVKLDKHSLKAIGVNALVDIKKLAYEHLSNIGTKYLDGPAYVIYPGNQVPESFRDRTTQASVTIDLSSAPSCSKVIGFIFCVIVGKFPSNDKNFIGCDCYLETGNGERVSLGHKMNNAWSSIHACEFLSDHVCMWFDEQCCLQNCERQDENIEELVAKVTFEYFAQSGSSWEKENDIMIKGCGVCPIYDSEYHDFIKQMELDLTLQNGTQYLKQKCKAFIFPPLQSENWKSATQGLKEILFL* 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0228 1140 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 740 1100 - -
Lan3g0228 1140 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 10 740 - -
Lan3g0228 1140 Pfam C-JID domain 942 1089 IPR045344 -
Lan3g0228 1140 Pfam Leucine Rich Repeat 609 628 IPR011713 -
Lan3g0228 1140 Gene3D - 345 430 IPR042197 -
Lan3g0228 1140 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 439 IPR027417 -
Lan3g0228 1140 Gene3D Ribonuclease Inhibitor 785 1054 IPR032675 -
Lan3g0228 1140 Gene3D - 11 179 IPR035897 -
Lan3g0228 1140 SUPERFAMILY L domain-like 489 879 - -
Lan3g0228 1140 Gene3D Ribonuclease Inhibitor 518 720 IPR032675 -
Lan3g0228 1140 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 740 IPR044974 GO:0006952
Lan3g0228 1140 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 740 1100 IPR044974 GO:0006952
Lan3g0228 1140 Pfam NB-ARC domain 195 423 IPR002182 GO:0043531
Lan3g0228 1140 PRINTS Disease resistance protein signature 288 302 - -
Lan3g0228 1140 PRINTS Disease resistance protein signature 212 227 - -
Lan3g0228 1140 PRINTS Disease resistance protein signature 381 395 - -
Lan3g0228 1140 PRINTS Disease resistance protein signature 837 853 - -
Lan3g0228 1140 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 154 IPR035897 -
Lan3g0228 1140 Gene3D - 180 340 IPR027417 -
Lan3g0228 1140 Gene3D Ribonuclease Inhibitor 721 784 IPR032675 -
Lan3g0228 1140 Pfam TIR domain 13 190 IPR000157 GO:0007165
Lan3g0228 1140 ProSiteProfiles TIR domain profile. 12 177 IPR000157 GO:0007165
Lan3g0228 1140 SMART till_3 13 151 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0228 Lan-Chr3 1492823 1497140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0228 14 880 WRKY Transcription Factor Family AT4G12020 33.371 4.75e-124 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0228 - - ccaj:109805840 1771.9