Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0217 ATGGCCACAGTACCAGGACAACTGATTTGGGAGATCGTGAAGAAGAACAACTCTTTCTTGGTGAAGGAGTTTGGTAGAGGCACTCAAAGTGTTGAATTTAGTAGAGAGTCTAATAATCTCTATAATCTCAACTCTTACAAATTCTCTGGTTTAGCGAACAAGAAAACCGTTACTATCCAGCCTGCTGGTAAAGATCAGTCTGTGTTGTTGGCAACTACCAAGACAAAGAAGCAAAACAAACCTGCTGCTTTAGTTCACAAATCTATTCTGAAGAAGGACTTTAGGAGGACGGCGAAGGCCGTGCAAAATCAGGTTGCCGATAACTACTACAGGCCTGATTTGAAGAAGGCAGCTCTTGCAAGGTTGAGTGCCGTGAGTAGGAGCCTGAGAGTTGCTAAGTCTGGTGCAAAGAAGAGAAACAGGCAAGCTGTCAGGAAGTGA 441 0.4399 MATVPGQLIWEIVKKNNSFLVKEFGRGTQSVEFSRESNNLYNLNSYKFSGLANKKTVTIQPAGKDQSVLLATTKTKKQNKPAALVHKSILKKDFRRTAKAVQNQVADNYYRPDLKKAALARLSAVSRSLRVAKSGAKKRNRQAVRK* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0217 146 PANTHER 60S RIBOSOMAL PROTEIN L28 1 145 IPR002672 GO:0003735|GO:0005840|GO:0006412
Lan3g0217 146 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Lan3g0217 146 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 145 - -
Lan3g0217 146 Gene3D - 6 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0217 Lan-Chr3 1398120 1400740 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0217 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 77.622 6.91e-79 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0217 K02903 - gmx:100500189 249.21