Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0207 ATGGATCTTATACAAAAATACAGTTTGAAGTTACCACTACACATTCTTATATTTCTGCTTCAACTTCACTTCATTTGTACTTACCCAACACCAATGAAATGTTCTGACACAACCCGGATTTGCACTTCTTTCTTGGCCTTTAAGCCTCAACCAAACCACACTATGGCTTTGATACAAAGCATGTTTGATGTGTTGCCAAATGACATAAGTGTTGAAAGCAATGGCTGGGATTACATATTCATCAGAAAAAACTGTTCTTGTGCTTTTAGTATGAACAAATATGTGTCTGACACTACCTTCACTGTAAGATCTAATGGAGGGTTTGTGCATGAGTTGGTGATGGATGCATATGAAGGTCTTGCTTTCTTGCCCAACACGACTCGTTGGGCAAGAAAGGGTTCCGTGATTTCGCTGAGATTGTTCTGTGGCTGCTCCAGTGGAGTGTGGAACTATTTGGTGAGTTATGTGATGAAAGATGGAGATAGTGTTGAATCCTTGGCAAGCAGATTTGGGGTTAGTATGGATAGTATTGAGACAGTAAATGGCATAGACAATCCAGATAGTGTCACTGTTGGTTCTTTGTATTATATTCCTTTGGATTCTGTTCCTGGTGAGCCTTATCACCCGAGGAACGATACTACTCCGGTTCCTGTCCCTTCTCCATCTGTCAATTATTTTTCAGTTGATGGAGTCAATCACAAGGCTAATGTACCCTATAGATGGATCATTGGGGGTTTAGGGATTGGTCTTGCTCTGATATTATTAAGCATGATTCTTTGTGTTTCCCTAAGATCATCGAATTGTTTTGATGAAGCTAGAAATCGTGCGAAAGATGCCGAGGGCAAGGTCTCTCATAAATTCCATATTCTTGGGAATCCATGTTTGTCTTTTGGTTCTAGAAGGTACATATGTGGCAAACCTGTAGAACAGAAGAAAAGTGATGGTGAATCCAGCAATCACCAAATCACAATTCCCATAGCTTCAACTCTAGGACCTGATGAATTTGGCATGGATGAGCCTTTAGTTTTTGCATATGAAGAGATTTTTGCTTCAACTGATGGTTTCTCTGATTCGAATCTGCTTGGACACAGAACATATGGTTCTGTTTACTACGGCTTCCTTCGTAACCAGGAAGTTGCTATTAAAAGAATGACATATACTAAGACTAAAGAATTCATGTCAGAGATGAAAGTTCTATGCAAGGTTCATCATGCTAATCTGGTGGAATTGATTGGCTACGCGGCTAGTCATGGCGAGCTCTTCCTCATATATGAATATGCTTCAAAGGGTTCCCTCAGAAGCCATTTGCATGATCCTCAAAATAAGGGCCATTCCTCACTTTCTTGGATCACAAGGGTCCAGATTGCTCTCGACGCTGCTAGGGGCCTTGAATACATACATGAGCATACAAAAACTCATTACATCCATCGAGATATCAAGACAAGCAACATTTTACTTGATGGATCATTTAAAGCCAAGATATCAGATTTCGGGTTAGCAAAACTTGTAGGTAAAACAAAGGAGGGAGAAACCACAAACACCAAAGTTGTTAGTACATATGGATATCTTGCTCCAGAATACTTGAGCAATGGCTTTGCAACAACTAAAAGTGATGTCTATGCATTTGGTGTTGTTCTTTTTGAGATTATATCAGGGAAGGATTCCATCATTCAAACCGAAGGCACGATGACAAAAAATATTGAAAGGCGTTCGCTGGCATCTATTATGTTGGCAGTTCTAAAGAACTCACCTGATTCCATGAGCATGTCAAGTATGAGAGACTACATTGATCCTAATATGATGAATCTGTATCCTCATGATTGTGTATTTAAGATGACAATGCTGGCAAAGCAATGTGTGGATAATGATCCTATTTTAAGACCTGATATGAAGCAAGTTGTGATTTCCCTCTCACAAATCCTCCTATCTTCTGTTGAGTGGGAAGCTACTCTAGCTGGTAATAGCCAAGTATTCAGTGGACTTGTTCAAGGAAGATAG 1998 0.3984 MDLIQKYSLKLPLHILIFLLQLHFICTYPTPMKCSDTTRICTSFLAFKPQPNHTMALIQSMFDVLPNDISVESNGWDYIFIRKNCSCAFSMNKYVSDTTFTVRSNGGFVHELVMDAYEGLAFLPNTTRWARKGSVISLRLFCGCSSGVWNYLVSYVMKDGDSVESLASRFGVSMDSIETVNGIDNPDSVTVGSLYYIPLDSVPGEPYHPRNDTTPVPVPSPSVNYFSVDGVNHKANVPYRWIIGGLGIGLALILLSMILCVSLRSSNCFDEARNRAKDAEGKVSHKFHILGNPCLSFGSRRYICGKPVEQKKSDGESSNHQITIPIASTLGPDEFGMDEPLVFAYEEIFASTDGFSDSNLLGHRTYGSVYYGFLRNQEVAIKRMTYTKTKEFMSEMKVLCKVHHANLVELIGYAASHGELFLIYEYASKGSLRSHLHDPQNKGHSSLSWITRVQIALDAARGLEYIHEHTKTHYIHRDIKTSNILLDGSFKAKISDFGLAKLVGKTKEGETTNTKVVSTYGYLAPEYLSNGFATTKSDVYAFGVVLFEIISGKDSIIQTEGTMTKNIERRSLASIMLAVLKNSPDSMSMSSMRDYIDPNMMNLYPHDCVFKMTMLAKQCVDNDPILRPDMKQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0207 665 Gene3D Transferase(Phosphotransferase) domain 1 428 652 - -
Lan3g0207 665 ProSiteProfiles Protein kinase domain profile. 355 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0207 665 Gene3D LysM domain 148 204 IPR036779 -
Lan3g0207 665 SMART LysM_2 154 198 IPR018392 -
Lan3g0207 665 SUPERFAMILY Protein kinase-like (PK-like) 337 637 IPR011009 -
Lan3g0207 665 SMART serkin_6 355 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0207 665 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 32 665 IPR044812 GO:0019199|GO:0045087
Lan3g0207 665 ProSiteProfiles LysM domain profile. 153 197 IPR018392 -
Lan3g0207 665 SUPERFAMILY LysM domain 153 198 IPR036779 -
Lan3g0207 665 Gene3D Phosphorylase Kinase; domain 1 331 426 - -
Lan3g0207 665 Pfam Protein tyrosine and serine/threonine kinase 360 635 IPR001245 GO:0004672|GO:0006468
Lan3g0207 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Lan3g0207 665 CDD LysM 153 197 IPR018392 -
Lan3g0207 665 Pfam LysM domain 155 192 IPR018392 -
Lan3g0207 665 PANTHER BNAA06G02020D PROTEIN 32 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0207 Lan-Chr3 1327007 1331536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0207 31 665 Receptor kinase-like Gene Family AT1G51940 64.697 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lan3g0207 PK_Tyr_Ser-Thr 8.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0207 - - gmx:100796989 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0207 3 1327007 1331536 Lan9g0652 9 9631081 9638784 PCT
Lan9g0652 9 9631081 9638784 Lan3g0207 3 1327007 1331536 PCT