Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0200 ATGGCATCCTCCATTTTGAGCATAATGTGTACTACTTGTGTCATCATTTTCTTGGCTTCTACTAATACTTCTGTTGTTGAAGGTGGAAGAGAATTCAAAGTTGGTGATCACTTAGGTTGGCACCAACCTCTCCCTAACAATACTGTCTTTTATATCCAATGGGCTGAAAGGAACAGATTCCAAGTTGGAGATTCTCTCCTTTTTGAGTACCAGAATGACTCAGTTCTTACTGTGGAGAAAATGGACTATATTAATTGTGATACAAGCAATCCCATCACTGAATATAACAATGGGAATAGCATTGTGAATCTTGGTAGACCTGGGGCATTCTTCTTCATCAGTGGAAATGAAGATCACTGCATCAATGGTCAAAAGTTAGTTGTGGAAGTAATGTCACCACATCAAATTCCAAAATCATCACCATCACCATCACCATCCATTTCTCTTCCACCTGAAGGTTCATCAGAAATGGCTCCTTCACCTTCACCTTATGCTTCTGATCATAGCTTAGGGGATTCAACCTCAGCCTCAGCCTCTTTGGTGCTTGGTCCAGTCCCTATGGCTTCTTTGACCACATTCGTAATTGTGTTTCTGTTAACACCTTAG 606 0.4076 MASSILSIMCTTCVIIFLASTNTSVVEGGREFKVGDHLGWHQPLPNNTVFYIQWAERNRFQVGDSLLFEYQNDSVLTVEKMDYINCDTSNPITEYNNGNSIVNLGRPGAFFFISGNEDHCINGQKLVVEVMSPHQIPKSSPSPSPSISLPPEGSSEMAPSPSPYASDHSLGDSTSASASLVLGPVPMASLTTFVIVFLLTP* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0200 201 SUPERFAMILY Cupredoxins 30 131 IPR008972 -
Lan3g0200 201 Pfam Plastocyanin-like domain 47 124 IPR003245 GO:0009055
Lan3g0200 201 ProSiteProfiles Phytocyanin domain profile. 30 132 IPR003245 GO:0009055
Lan3g0200 201 Gene3D - 29 135 IPR008972 -
Lan3g0200 201 MobiDBLite consensus disorder prediction 149 170 - -
Lan3g0200 201 PANTHER BLUE COPPER PROTEIN 13 166 IPR039391 GO:0009055
Lan3g0200 201 MobiDBLite consensus disorder prediction 133 170 - -
Lan3g0200 201 CDD OsENODL1_like 30 131 IPR041846 -
Lan3g0200 201 PANTHER EARLY NODULIN-LIKE PROTEIN 2 13 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0200 Lan-Chr3 1266174 1267285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0200 6 148 Phytocyanin Superfamily AT1G79800 46.154 6.48e-44 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0200 - - gmx:102664880 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2113 6 31653272 31654318 Lan3g0200 3 1266174 1267285 LSH
Lan10g0262 10 1652588 1653758 Lan3g0200 3 1266174 1267285 LSH