Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0199 ATGGGTTTGTTTTCTTTGTACCTCTTCCTCTGCGTGTTGTTGTTGATTACAATCATGGCGGAAAAAGCAGTTACCATCAGAACCAGAAAGTTCATGACCAACAGGCTTCTTTCCAGGAAGCAATTCATCATTGACGTTCTTCATCCAGGGAGGGCAAATGTGTCAAAGGCTGAGCTTAAGGAGAAGCTTGCGAGAATTTATGATGTGAAGGATGTTAACTCTGTATTCGTATTCAAATTCAGAACACATTTTGGAGGTGGCAAATCAACTGGTTTTGGTTTGATCTATGACTCTGTTGAGAATGCAAAGAAGTATGAGCCTAAGTACAGGCTTATCAGGAATGGTCTTGACACTAAGGTAGAGAAGTCAAGGAAGCAATTGAAGGAAAGGAAAAACAGAGCTAAGAAGATTCGGGGAGTGAAGAAGACCAAAGCTTCTGATGCTGCCAAAGCTGGAAAGAAGAAATAA 468 0.4103 MGLFSLYLFLCVLLLITIMAEKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRANVSKAELKEKLARIYDVKDVNSVFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKTKASDAAKAGKKK* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0199 155 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 24 126 IPR012678 GO:0003735|GO:0005840|GO:0006412
Lan3g0199 155 MobiDBLite consensus disorder prediction 121 155 - -
Lan3g0199 155 Hamap 30S ribosomal protein S24e [rps24e]. 22 124 IPR001976 GO:0003735|GO:0005840|GO:0006412
Lan3g0199 155 ProSitePatterns Ribosomal protein S24e signature. 84 106 IPR018098 -
Lan3g0199 155 Gene3D - 16 150 - -
Lan3g0199 155 PANTHER 40S RIBOSOMAL PROTEIN S24 19 155 IPR001976 GO:0003735|GO:0005840|GO:0006412
Lan3g0199 155 PANTHER 40S RIBOSOMAL PROTEIN S24 19 155 - -
Lan3g0199 155 Pfam Ribosomal protein S24e 44 121 IPR001976 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0199 Lan-Chr3 1263285 1264996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0199 19 150 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 86.364 4.24e-83 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0199 K02974 - pvy:116133809 236.113