Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0198 ATGACTCAAAATTCTACCACCACCACCACTAACTCCCTCACCAAAAACTCTTCCAACAAAACAGAGTCTAGAAAACAGAGCAAAAACAGAGCACCAAAACCCAGAGATTGTAAAAACCACCCTGTTTACCACGGTGTTCGAAAGCGCAGTTGGGGCAAATGGGTATCTGAAATTCGCGAACCTCGCAAGAAATCTCGAATCTGGCTTGGAACTTTCGCTACACCTGAAATGGCAGCACGAGCACACGATGTTGCAGCTATGAGCATTAAGGGTAACTCAGCTATTCTCAATTTCCCTAACATATCTCACGTGCTTCCAAGGCCACTCACGTGTACTCCACGTGACATTCAAGCTGCGGCTGCAGAAGCTGCAGCCATGGTTAAGTTTGACTCAGAGACTGAGACAGAGTCTTCAGAACTGAGTGAGATTGTTCAACTTCCAAATTTAGAACAAGGGACCTTTGACTCGGTGGACTCAGTAACTGAGTTCATGTTTATTGACTCGCTGGATAGTTGGCTGTATCCACCAATGAGGGATGAGGTAATAGAATTCATGTTTCAAGGAGATAGTTTTTTACTAGAGTAG 585 0.4462 MTQNSTTTTTNSLTKNSSNKTESRKQSKNRAPKPRDCKNHPVYHGVRKRSWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAAMSIKGNSAILNFPNISHVLPRPLTCTPRDIQAAAAEAAAMVKFDSETETESSELSEIVQLPNLEQGTFDSVDSVTEFMFIDSLDSWLYPPMRDEVIEFMFQGDSFLLE* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0198 194 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 190 - -
Lan3g0198 194 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Lan3g0198 194 MobiDBLite consensus disorder prediction 1 20 - -
Lan3g0198 194 CDD AP2 43 100 IPR001471 GO:0003700|GO:0006355
Lan3g0198 194 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 6 190 - -
Lan3g0198 194 MobiDBLite consensus disorder prediction 1 43 - -
Lan3g0198 194 Pfam AP2 domain 41 91 IPR001471 GO:0003700|GO:0006355
Lan3g0198 194 SUPERFAMILY DNA-binding domain 42 99 IPR016177 GO:0003677
Lan3g0198 194 MobiDBLite consensus disorder prediction 21 43 - -
Lan3g0198 194 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Lan3g0198 194 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Lan3g0198 194 Gene3D AP2/ERF domain 42 100 IPR036955 GO:0003700|GO:0006355
Lan3g0198 194 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0198 Lan-Chr3 1258621 1259315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0198 11 176 AP2-EREBP Transcription Factor Family AT5G11590 51.042 2.18e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan3g0198 AP2 3.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0198 K09286 - gmx:100801780 227.639