Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0196 ATGGCTGGCATAGCATTTGGACGCTTTGATGATTCCTTCAGTTTTGGCTCCATCAAAGCCTATCTTGCTGAGTTCATCTCAACATTGCTCTTTGTTTTTGCTGGTGTTGGTTCAGCCATAGCATATGGTAAGTTGACATCAGATGCAGCTCTTGATCCTGCTGGGTTAGTAGCAGTTGCTGTTGCTCATGCTTTTGCTCTATTTGTTGCTGTTTCTGTTGGTGCCAACATTTCTGGTGGTCATGTCAACCCAGCTGTGACTTTTGGTTTGGCTATTGGTGGCCAAATCACAATCCTTACTGGTATCTTCTACTGGATTGCTCAGCTTCTTGGTTCCATTGTTGCTTGCTTTCTCCTCAAGTTTGTCACTGGAGGCTTGGCTATTCCTATTCACAGTGTAGCTGCTGGAGTTGGAGCTGCAGAAGGAGTTGTTACTGAGATCATTATCACATTTGCATTGGTGTACACTGTTTATGCCACAGCAGCTGATCCAAAGAAGGGTCCATTGGGGACCATTGCACCCATTGCTATTGGTTTCATTGTTGGTGCCAATATCTTAGCTGCAGGGCCATTCTCTGGTGGCTCAATGAACCCTGCAAGATCTTTTGGCCCTGCAGTTGTTAGTGGTGACTTCAGTGGTAACTGGATCTATTGGGTTGGACCTTTGGTTGGTGGTGGTTTAGCTGGTGCTATATATGGCTATGTTTTCCTTCCCTCTGAGCATGTACCTTTGGCTACTGATTTTTGA 747 0.4538 MAGIAFGRFDDSFSFGSIKAYLAEFISTLLFVFAGVGSAIAYGKLTSDAALDPAGLVAVAVAHAFALFVAVSVGANISGGHVNPAVTFGLAIGGQITILTGIFYWIAQLLGSIVACFLLKFVTGGLAIPIHSVAAGVGAAEGVVTEIIITFALVYTVYATAADPKKGPLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSGNWIYWVGPLVGGGLAGAIYGYVFLPSEHVPLATDF* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0196 248 Gene3D Glycerol uptake facilitator protein. 2 246 IPR023271 -
Lan3g0196 248 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Lan3g0196 248 CDD MIP 19 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan3g0196 248 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan3g0196 248 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan3g0196 248 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan3g0196 248 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan3g0196 248 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan3g0196 248 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan3g0196 248 PANTHER MIP PROTEIN 1 248 - -
Lan3g0196 248 SUPERFAMILY Aquaporin-like 13 243 IPR023271 -
Lan3g0196 248 TIGRFAM MIP: MIP family channel proteins 23 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan3g0196 248 Pfam Major intrinsic protein 16 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan3g0196 248 PANTHER AQUAPORIN-8 1 248 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0196 Lan-Chr3 1245553 1247459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0196 1 248 Major Intrinsic Protein MIP AT3G16240 83.200 2.60e-145 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0196 K09873 - rcu:8273814 419.083