Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0193 ATGATGGCAGGAAACTCTAACTGGTGGAACATGCATCCACCTTCTTTGAACCCTTCTCAATATGTGCTTGGATCTTCTTCAATTCCCTTCAATTCTTTGGCAGAAAATCATGAGCCTCCTCAATCATGGAGTCAACTGCTTTTCACTGGATTACCTGGGGAAGAAGAAAGGATGGGTCTGAGTCATTTTCAAACTAAAAAGTTGGAAAACTGGGATGAACAAATTCTTGATCCATCTTCAAGAGTTCCTATTTTTGATATAATTAAGCAAGAAGTTTCTCAAAGTGGTAATTTGTATGGCCATGAGCATGAGGAATTTCAGGTTGCTGGTTCATCTTGGTCACATATGGTTCCAATTTTTTCACCTATGTCTTGTGTCACTACTAGCTTGAGTAGTAATAATATATTGGACTTCACTTATAACAATGTAGACCAGAAGAAGATTAATCAACTTCTAGATCAAACATCTGAGTGTAATAGCACTGCCCCTATTGGAGTGAGTAATAAGAAGGCTAGGGTTCAACAATCTTCAAACCAACCACCTCTAAAGGTGAGGAAGGAAAAGCTAGGTGATAGAATAACAGCCCTTCACCAACTAGTTTCTCCATTTGGAAAGACTGACACAGCTTCTGTGTTGTTAGAAGCCATTGGATATATCAGATTCCTGCAGGGTCAAATTGAGGCACTAAGCTCTCCTTACTTGGACAATGCATCAAAAAACATGAGGAATCAACCCTATGTACATGTAGAAAGAAATTCTGTATTTCCTGAGGACCCAGGTCAGCTGTTGGATGAAAATGGCCTAAAAAGGAAGGGAGCTTCTTCATACAAGGATGGAGAAGAAAAACCAAAGGACTTGAGGAGTAGAGGGTTATGCTTGGTCCCTTTGTCTTGCACCCAACATGTTGGAAGTGAAAATGGAGCTGATTATTGGGCACCTTCATATGCCAATGGATTTTAG 960 0.4 MMAGNSNWWNMHPPSLNPSQYVLGSSSIPFNSLAENHEPPQSWSQLLFTGLPGEEERMGLSHFQTKKLENWDEQILDPSSRVPIFDIIKQEVSQSGNLYGHEHEEFQVAGSSWSHMVPIFSPMSCVTTSLSSNNILDFTYNNVDQKKINQLLDQTSECNSTAPIGVSNKKARVQQSSNQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLDNASKNMRNQPYVHVERNSVFPEDPGQLLDENGLKRKGASSYKDGEEKPKDLRSRGLCLVPLSCTQHVGSENGADYWAPSYANGF* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0193 319 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 10 306 - -
Lan3g0193 319 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 183 234 IPR036638 GO:0046983
Lan3g0193 319 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 173 222 IPR011598 GO:0046983
Lan3g0193 319 PANTHER OS05G0228400 PROTEIN 10 306 - -
Lan3g0193 319 MobiDBLite consensus disorder prediction 256 283 - -
Lan3g0193 319 CDD bHLH_AtbHLH_like 183 230 IPR045239 -
Lan3g0193 319 Gene3D - 183 244 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0193 Lan-Chr3 1224172 1227995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0193 33 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 43.529 8.27e-43 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0193 - - gmx:100802121 477.633