Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0182 ATGCCCAAGAAATTCCAAAAAACCCTTCATGATTACATCTCCAAGATCAAAACCTATCACCACCCACAAATTCAATTACCCTTTCACTCATTACCCTTTTCTAAGGGTTGGATTCTCTCAGGATGTAAGCATCCAAAGACACCTTCTTTTGCCTTAGAAGGTAGAAATGAAACTCATGATGGAAGCAATAGCAGCAACAACAACGATCATAAGGATGATGCTGCAGCAACACTAGCTGATGTTGATCGTTTCCTCTTGGAAAATTTCAAATCTTTATACCTCAAAGATGATGATGGTGATGGAGAAAATGGAAGTAAATACAAGAATACTAGAAGGGTGTTCTTAGAAAATCAAAGCCATGGTGAAGAAGGACCAAACCTAGGTCCTATGTTGTTTGATTCACCAAGGTTGTTGGAAATGCCACGTGATCTTTGTGGCTCCACTAGATTTTTCGTGAAGCCGGGGTTCTCCGGATCACTAGTGGTAGACGATGCAATGACAAGCATGACAACAACGCCAAGAAAAATATCTGATCACGATGAGACAGGCTCGACCGCAACCTCAACCACGACCGCAATAACAGTCAACGATTCATCGTCAAAGGAAGGTGTTAACATGGAAAAGACAACACTTCCAGATAATTGCATTGCCCTATTGTCATGCTCACCTAACCCATATGAGGAATTTAAGCGTTCAATGAAAGAGATGGTGGAAACAAGAGCAAGGAACCATGAAGGTGAGATTGATTGGGAATTCATGGAAGATTTATTGTTTTGTTATCTGAATCTGAATGAAAAGAAGTCACACAAGTTCATTCTTAGTGCTTTTGTGGATATTATCACTGTCATGCGTCAAAATTCTGAGTCTGGGACTATGATGAAGGTGAAGCCACATAGTGTTAGAACTGTTATGATCAGTAGAAAGGTGAAGAAATAA 936 0.4006 MPKKFQKTLHDYISKIKTYHHPQIQLPFHSLPFSKGWILSGCKHPKTPSFALEGRNETHDGSNSSNNNDHKDDAAATLADVDRFLLENFKSLYLKDDDGDGENGSKYKNTRRVFLENQSHGEEGPNLGPMLFDSPRLLEMPRDLCGSTRFFVKPGFSGSLVVDDAMTSMTTTPRKISDHDETGSTATSTTTAITVNDSSSKEGVNMEKTTLPDNCIALLSCSPNPYEEFKRSMKEMVETRARNHEGEIDWEFMEDLLFCYLNLNEKKSHKFILSAFVDIITVMRQNSESGTMMKVKPHSVRTVMISRKVKK* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0182 311 MobiDBLite consensus disorder prediction 182 205 - -
Lan3g0182 311 MobiDBLite consensus disorder prediction 56 72 - -
Lan3g0182 311 MobiDBLite consensus disorder prediction 172 205 - -
Lan3g0182 311 MobiDBLite consensus disorder prediction 49 72 - -
Lan3g0182 311 PANTHER TRANSCRIPTION REPRESSOR OFP14 3 294 - -
Lan3g0182 311 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 294 IPR038933 GO:0045892
Lan3g0182 311 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 217 282 IPR006458 -
Lan3g0182 311 Pfam Transcriptional repressor, ovate 222 281 IPR006458 -
Lan3g0182 311 ProSiteProfiles OVATE domain profile. 218 282 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0182 Lan-Chr3 1180188 1181329 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lan3g0182 Ovate 1.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0182 - - lja:Lj3g3v0160750.1 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0242 10 1533596 1534651 Lan3g0182 3 1180188 1181329 LSH
Lan3g0182 3 1180188 1181329 Lan5g0569 5 11364002 11365566 PCT
Lan5g0569 5 11364002 11365566 Lan3g0182 3 1180188 1181329 PCT