Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0175 ATGGGTATGAACAACAATAGAGTAGAACACTTTGATTGCCATGACCAACAACAATTTCAAACCATTATCAAAATCCAACAACAACAACAACAACTTGATATAGCAATGGAAATTCACAAGGTTGAGTTACCTCCACAAAGAACAACACTCCACAAACTACAACAAAGACTCTCTGAAATATTCTTCCCTGATGATCCTTTCTACCGTTTCAAGAATCAATCATGTTTCATGAAGTTCATTCTAGGACTTCAATATTTGTTCCCTATATTCCAATGGGGTCCTCAATATAACTTTCACCTTCTTCGTTCTGATGCTATCTCTGGACTCACCATTGCTAGTCTTGCCATTCCTCAGGGAATCAGTTATGCAAAGCTTGCAAACTTGCCACCTATTGTTGGATTATATTCGAGTTTTGTGCCCCCATTGATATATTCTCTGCTTGGGAGTTCTAAACATCTTGGTGTTGGTCCAGTTTCAATTGCATCTTTGGTCATGGGATCAATGTTAAGTGAAACAGTTTCTTTCACTCAAGAACCAATTCTATATCTCAAATTGGCTTTCACTGCCACTTTCTTTGCTGGTGTATTCCAAGCCTCTTTGGGTCTACTAAGGTTAGGATTTGTGATTGATTTTCTATCAAAGGCAACACTAGTGGGGTTCATGGCTGGTGCTGCAGTAATTGTTTCACTGCAGCAGCTTAAAGGGTTACTTGGAATAGTGCACTTTACCACTAAGATGCAAATAGTTCCTGTACTCATCTCTGTTTTCAAGCAAAGAGACGAGTGGTCATGGCAAACTATTGTAATGGGATTTGGGTTCCTGGCCTTCTTGCTCACAACAAGACACATTAGCTTAAAGAAACCAAAACTATTCTGGGTTTCAGCAGCTGCACCATTAACATCAGTTATTGTATCAACCATCTTAGTTTTCCTTCTGAGAAACAAGACTCATAAGATAGCAATTATAGGGAATTTACCAAAGGGTCTTAATCCACCATCATCAAACATGTTGTATTTCAATGGTCCTTTCTTGGCTCTAGCTATCAAAACTGGCCTTGTCACTGGAATCTTATCTCTCACTGAAGGAATTGCAGTAGGTAGAACATTTGCAGCACTTAAGAATTATCAAGTTGATGGAAACAAAGAAATGATGGCTATTGGACTTATGAACATTGCTGGTTCTTGTTCTTCATGCTATGTTACAACAGGATCCTTTTCTCGATCAGCTGTTAACTATAATGCTGGAGCACAGACAACAGTTTCAAATATAATCATGGCTGCAGCTGTTCTAGTGACTCTTCTGTTTCTCATGCCGTTGTTTCATTATACACCGAATGTTGTCTTAGCAGCCATAATCATCACAGCTGTGATTGGACTAATAGATTATCAAGCTGCATTTAAATTGTTGAAGGTTGACAAGCTTGATTTCTTGGCATGTTTGTGCTCCTTTTTCGGCGTTCTGTTCATTTCAGTACCCGTAGGCCTCGGTATCGCGGTTGCAATATCAGTCTTCAAGATCCTGCTTCATGTTACTAGACCAAACATTTTGGTTTTGGGAAATATACCAGGAACACAAATATTCCACAATGTTAACCAATACAAAGAAGCTTCAAGAGTTCCTTCATTTCTCATATTAGGGGTTGAATCTCCAATCTATTTCGCTAATTCAACTTACCTTCAAGAAAGGATTCTGAGATGGGTTCGAGAAGAGGAAGAACGCGTAAAAGCAAATAATGGAAGTTCATTGAAGTGCATAATTCTAGACATGACAGCTGTTACAGCCATAGACACAAGTGGACTTGACACTTTATGTGAACTTAGAAAGATGCTGGAGAAAAAATTACTTAAGCTAGTGTTGGCAAATCCTGTGGGAAATGTGATAGAAAAGTTACACCAGTCAAAAAATTTGGATGAGCTTGGATTAAAAGGAATCTATCTCACAGTAGGAGAAGCTGTAGCTGATATTTCATCATCATGGAAAGCTCAGCCATAA 1992 0.386 MGMNNNRVEHFDCHDQQQFQTIIKIQQQQQQLDIAMEIHKVELPPQRTTLHKLQQRLSEIFFPDDPFYRFKNQSCFMKFILGLQYLFPIFQWGPQYNFHLLRSDAISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSLLGSSKHLGVGPVSIASLVMGSMLSETVSFTQEPILYLKLAFTATFFAGVFQASLGLLRLGFVIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTTKMQIVPVLISVFKQRDEWSWQTIVMGFGFLAFLLTTRHISLKKPKLFWVSAAAPLTSVIVSTILVFLLRNKTHKIAIIGNLPKGLNPPSSNMLYFNGPFLALAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTTVSNIIMAAAVLVTLLFLMPLFHYTPNVVLAAIIITAVIGLIDYQAAFKLLKVDKLDFLACLCSFFGVLFISVPVGLGIAVAISVFKILLHVTRPNILVLGNIPGTQIFHNVNQYKEASRVPSFLILGVESPIYFANSTYLQERILRWVREEEERVKANNGSSLKCIILDMTAVTAIDTSGLDTLCELRKMLEKKLLKLVLANPVGNVIEKLHQSKNLDELGLKGIYLTVGEAVADISSSWKAQP* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0175 663 SUPERFAMILY SpoIIaa-like 537 654 IPR036513 -
Lan3g0175 663 ProSiteProfiles STAS domain profile. 532 655 IPR002645 -
Lan3g0175 663 CDD STAS_SulP_like_sulfate_transporter 533 648 - -
Lan3g0175 663 Pfam STAS domain 533 651 IPR002645 -
Lan3g0175 663 Pfam Sulfate permease family 101 480 IPR011547 GO:0016021
Lan3g0175 663 ProSitePatterns SLC26A transporters signature. 130 151 IPR018045 GO:0008271|GO:0008272
Lan3g0175 663 TIGRFAM sulP: sulfate permease 88 651 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan3g0175 663 PANTHER SLC26A/SULP TRANSPORTER-RELATED 29 663 - -
Lan3g0175 663 Gene3D STAS domain 512 657 IPR036513 -
Lan3g0175 663 PANTHER SULFATE TRANSPORTER 29 663 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0175 Lan-Chr3 1136779 1141990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0175 1 663 Inorganic Solute Cotransporters AT3G15990 74.625 0.0 1024
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0175 K17471 - gmx:100812617 1091.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0236 10 1502267 1507776 Lan3g0175 3 1136779 1141990 LSH
Lan3g0175 3 1136779 1141990 Lan2g0447 2 4839906 4846026 PCT
Lan2g0447 2 4839906 4846026 Lan3g0175 3 1136779 1141990 PCT