Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0165 ATGAAGAAAGAAAAGAGTGTTACTTTGACCGCTTTAGAGCTCCCTGGTCGACTGACTCGTTCTCAAGCTGCTTCCTGTTCTGAATCTAGACAGTTTCCCCCTTTGAAGGTCGTAACACAACAAAATCAGAAGCAGTCTAAAGGAGCCAATCCAAAAAGACCAGTATCAGATAATACACGCCTTGGACGTAAAAGGAGGAGTGTCCTTCGGGATGTCACTAACATTAGCTGTGAAAATACTTACAGTAGCTCTTTCAATGCAACTAAAATTCAGGCTAAGAAAAGCAAGTTGACTATGGCTGCTCAACTTAATGTTTCCATTGTGGTTCAGTCAGATGCTATGGAGCAATCACAAATTCAACTTGGCTCAAATGCAAAGGGTTTACCGGAAATAGGGCTTAGATCAGAAGATGTTACATGCTCCGTGAATTTGCAACACAATGCACTTGACAGTCAGACACCCGGAATATCTGCTCAGACATTAATTTCTCAAAAGAAAGTTCTACAAATTGTTGAAGCCAAGAAAGGTAACCTTTCTGGAGCTCCAAATATAGCAAAGGATCCAGATGTCACTGATATAGATGCTGGTTTTGAAGATCCTATATTTTGCACCATCTATGTTGTTGATATCTATGACAATTTACGTGTCGCTGAGCTGTCAAGAAGGCCTTATCCTCACTTTATGGAAACAGTACAGCAAGATATCACTCAAACCATGCGCGGGTTACTGGTTGATTGGCTCGTAGAGGTTTCTGAGGAATACAAATTGGTACCAGACACTCTTTACCTATCTATTTATCTTATAGATTGGTTTCTCTCCAAAAATTGCATCGAAAGACAAAGACTGCAGCTCCTGGGCATCACCTGCATGTTAATTGCTTCGAAGTATGAAGAGATTAATGCCCCGCGCATTGAAGAATTCTGCCTTATCACAGACAACACGTACACCAAAGAAGAGGTATTGAAAATGGAGATTCAAGTGTTAAAGTCCGTTGCCTATCAACTCTTTGCTCCCACCACAAAAACTTTCCTCAGGAGGTTTCTTCGAGCAGCACAAGCTTCTTACCCGGACCCTATCATTGATTTGGAGTGCCTGGGCAACTATCTAGCTGAACTAACACTGATGAACTATGATTTCTTAAATTTCCTTCCTTCTATGATTGCTGCATCCGCTGTATTTCTTGCCGGATGGACATTAGATCAGTCAAGTCACCCATGGAATCCAACTCTTCAACACTATACCGGTTACAAAGCATCAGATCTGAAATCGACAGTTCTTGCATTACGGGATATGCAGCTGAATACCGATGGTTGCCCATTAATCACCATACGGACAAAGTACAGGCAAGAAAAGTTTAAATGTGTAGCAGCTTTGTCTTCATCAAAACTGCAGGATGCTATGTTCCGAAGACAAAGCTGA 1419 0.4151 MKKEKSVTLTALELPGRLTRSQAASCSESRQFPPLKVVTQQNQKQSKGANPKRPVSDNTRLGRKRRSVLRDVTNISCENTYSSSFNATKIQAKKSKLTMAAQLNVSIVVQSDAMEQSQIQLGSNAKGLPEIGLRSEDVTCSVNLQHNALDSQTPGISAQTLISQKKVLQIVEAKKGNLSGAPNIAKDPDVTDIDAGFEDPIFCTIYVVDIYDNLRVAELSRRPYPHFMETVQQDITQTMRGLLVDWLVEVSEEYKLVPDTLYLSIYLIDWFLSKNCIERQRLQLLGITCMLIASKYEEINAPRIEEFCLITDNTYTKEEVLKMEIQVLKSVAYQLFAPTTKTFLRRFLRAAQASYPDPIIDLECLGNYLAELTLMNYDFLNFLPSMIAASAVFLAGWTLDQSSHPWNPTLQHYTGYKASDLKSTVLALRDMQLNTDGCPLITIRTKYRQEKFKCVAALSSSKLQDAMFRRQS* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0165 472 CDD CYCLIN 338 428 IPR013763 -
Lan3g0165 472 PANTHER CYCLIN-A2-4 45 468 - -
Lan3g0165 472 PANTHER CYCLINS 45 468 IPR039361 -
Lan3g0165 472 MobiDBLite consensus disorder prediction 20 53 - -
Lan3g0165 472 CDD CYCLIN 239 328 IPR013763 -
Lan3g0165 472 SMART Cyclin_C_2 338 461 IPR004367 -
Lan3g0165 472 PIRSF Cyclin_A_B_D_E 16 470 IPR039361 -
Lan3g0165 472 Gene3D - 223 336 - -
Lan3g0165 472 SUPERFAMILY Cyclin-like 198 335 IPR036915 -
Lan3g0165 472 SMART cyclin_7 245 329 IPR013763 -
Lan3g0165 472 SMART cyclin_7 342 430 IPR013763 -
Lan3g0165 472 Gene3D - 209 457 - -
Lan3g0165 472 MobiDBLite consensus disorder prediction 19 66 - -
Lan3g0165 472 SUPERFAMILY Cyclin-like 338 459 IPR036915 -
Lan3g0165 472 Pfam Cyclin, N-terminal domain 209 335 IPR006671 -
Lan3g0165 472 Pfam Cyclin, C-terminal domain 338 460 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0165 Lan-Chr3 1064968 1071597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0165 1 468 Core Cell Cycle Gene Families AT1G80370 51.899 1.27e-163 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0165 K06627 - gmx:100789757 599.356