Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0160 ATGGAGAGTTTAAAAACACCTTTGAAGGGTGTTTTAGAGGATATTCGAGGAAGAGCAGTGCATTATAAAGAAGATTGGAGTTCAGCTCTTTCTTCAGGATTTGGGATATTGGCTCCAACTACATATATTTTCTTTGCTTCTGCTCTTCCTGTTATTGCTTTTGGTGCGCAGCTTAGTAGAGAGACAGATGGAAGCTTGAGCACAGTAGAAACATTGGCTTCTACAGCAATTTGTGGAATCATACACTCAATTCTTGGTGGTCAGCCTCTGTTAATAGTAGGAGTTGCAGAACCAACTATCATCATGTATACATATTTGTACAACTTTGCTAAAAATAGGGATCATTTAGGAAAAGATCTCTATTTAGCTTGGGCAGGATGGGTTTGTGTTTGGAGTGCTCTATTATTGTTTCTTCTAGCAATATTCAATGCTGGAAATATAATCAATAGATTTACAAGGGTTGCTGGTGAGGTTTTTGGCATGTTGATTACAGTCTTGTTCATTCAAGAAGCTATCAAGGGAATGGTAAGTGAGTTTATTGCTCCCAAAGAGGAAGATCCAACATTGGACAAGTACCAATTTCATTGGTTGTATGCAAATGGATTGTTGGGTATTATATTCACCTTTGGACTTATTTATACTGCTTTAAAAACCAGAAGTGCAAGATCATGGTTATATGGAACAGGATGGTTAAGAAGTTTCATTGCAGACTATGGTGTGCCTTTAATGGTAGTGGTGTGGACATTACTATCATTCATTATTCCAAGTAAAGTTCCTTCTGGAGTTCCAAGAAGGCTCATTGCCCCTCTAGCTTGGGAACCTGCATCTTTACACCATTGGACAGTTATCAAAGATATGGGAAAGGTTTCTCCGACTTATATTTTCGCGGCTTTTATTCCGGCTATTATGGTAGCCGGGCTTTACTTCTTTGACCATAGTGTTGCTTCTCAGCTAGCCCAACAGAAGGAATTCAATCTAAAGAAACCTTCTGCGTATCACTATGACATTTTGTTGTTAGGGTTCACTACTTTGCTTTGTGGACTTATTGGCTTACCACCTTCAAATGGAGTTTTGCCTCAATCCCCTATGCACACTAAGAGTCTATCAGTTCTCAAGAAACAGTTGATTCGAAAAAAGATGGTTAAAAGTGCCAAGGAAAGTATAAGGCGCAAAGCTAGCAATGCTGAAATCTATGGGAACATGCAAGAAGTGTTTATAGAATTGGATAGCAGCATAAATAAAAACTTAGTTGCCAAGGAACTAGAGGATTTGAAAGAAGTTGTCCTAAATGCTCAAGATAACGGAGACAACAAAGAGAGTACATTTGATCCTGAGAAACACATTGATGCATATCTTCCAGTCAGGGTAAACGAGCAAAGAGTAAGCAATCTATTGCAGTCACTCCTTGTAGCCGCATCGGCCTTCGCTATGCCGGCCATAGTAAAGATACCAACTTCAGTTCTTTGGGGATACTTTGCTTACATGGCCATTGATAGTCTTCTCGGGAATCAATTCTGGGAAAGAATACTACTTCTCTTTGTAGCACCTAATAGGCGGTACAAGGTGTTAGAAGGGGATCATGCTTCCTTTGTTGAGTTGGTTCCATATAAGAATATAATTTTGTTCACTATCTTCCAATGTATATATTTCTTGATTTGTTTTGGAGTTACATGGATTCCTATAGCTGGAATATTGTTTCCCTTGCCTTTCTTTGTGCTTATCACATTGAGGCAATATATACTCCCTAAGTTTTTCAAACCTAAACATCTAAGGGAATTGGATGCTGCTGAATATGAAGAAATAGTTGGTGCTCCAAGAACTAGTTTATCTTTGAGGGATTTGGATTTACCTTTGGAAGAAATAGAAGATGGTGAAATATTGGATGAGTTAACTACTAATAGAGGGGAATTGAAAATCAGAAATGTTAGCTCTAGTGAGGAAAGAAATAATCAGGTAATCATTTTTCAAATGCTTTACTTGATTTGGAAGGACCTTAATACTTTTTATTTTATTTCTTTTCCTTATATGTTGTATTTGTTTGAATGA 2046 0.3763 MESLKTPLKGVLEDIRGRAVHYKEDWSSALSSGFGILAPTTYIFFASALPVIAFGAQLSRETDGSLSTVETLASTAICGIIHSILGGQPLLIVGVAEPTIIMYTYLYNFAKNRDHLGKDLYLAWAGWVCVWSALLLFLLAIFNAGNIINRFTRVAGEVFGMLITVLFIQEAIKGMVSEFIAPKEEDPTLDKYQFHWLYANGLLGIIFTFGLIYTALKTRSARSWLYGTGWLRSFIADYGVPLMVVVWTLLSFIIPSKVPSGVPRRLIAPLAWEPASLHHWTVIKDMGKVSPTYIFAAFIPAIMVAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFTTLLCGLIGLPPSNGVLPQSPMHTKSLSVLKKQLIRKKMVKSAKESIRRKASNAEIYGNMQEVFIELDSSINKNLVAKELEDLKEVVLNAQDNGDNKESTFDPEKHIDAYLPVRVNEQRVSNLLQSLLVAASAFAMPAIVKIPTSVLWGYFAYMAIDSLLGNQFWERILLLFVAPNRRYKVLEGDHASFVELVPYKNIILFTIFQCIYFLICFGVTWIPIAGILFPLPFFVLITLRQYILPKFFKPKHLRELDAAEYEEIVGAPRTSLSLRDLDLPLEEIEDGEILDELTTNRGELKIRNVSSSEERNNQVIIFQMLYLIWKDLNTFYFISFPYMLYLFE* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0160 681 PANTHER BORON TRANSPORTER 4-RELATED 1 653 - -
Lan3g0160 681 Coils Coil 414 434 - -
Lan3g0160 681 Pfam HCO3- transporter family 7 179 IPR011531 GO:0006820|GO:0016021
Lan3g0160 681 Pfam HCO3- transporter family 199 374 IPR011531 GO:0006820|GO:0016021
Lan3g0160 681 Pfam HCO3- transporter family 454 544 IPR011531 GO:0006820|GO:0016021
Lan3g0160 681 PANTHER ANION EXCHANGE PROTEIN 1 653 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lan3g0160 681 Gene3D Helical hairpin bin 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0160 Lan-Chr3 1025959 1031994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0160 1 652 Antiporters AT1G74810 69.289 0.0 960
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0160 K24194 - gmx:100811184 1091.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0221 10 1384635 1388782 Lan3g0160 3 1025959 1031994 LSH