Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0122 ATGAATCTACTTGTTTTGTTCCTAGACCTACACATTTTGGTGCTAACCATTTCTCTTTTATCACCAATTCTTCATGCTTCAGATGCAAATGCAAATGCACAAGCTGAATCTCCAGGAACTCAAGATGTCAGAGTAGTGCACCACCAGAATTTGAATAAGAAAATTCTAGTAGCACTAATTGTTTGTTGTGTTCTACTTGGAGGAATCTTCATATTCTTATCATATGTCTGGTTTCGTAGACATAAAATCTTAAGATTCTCCAGCAGTAAAAGCGAAGGAACCATTGAAGCTGCAAAAGGAGAAACCTTAAACCCTATTGATGCTAAACTTTACTACTCAAGGATGACAGATAAGAAGAGTCCGGTTGCTATTTTCGACTTTCGATTATTAGAGGCTGCAACAAACAGCTTTAGCAAAAGTAATATTATGGGAGAGAGTGGTTCTAGAATTGTTTACAGAGCTTATTTTGATGAACATTTCAAGGCAGCTGTGAAGAAAGCAGATAGTGATGCTGATAGAGAATTTGAGAATGAAGTGAGTTGGTTGAGCAAGATATGGCATCAGAATATCATTAAACTTCTTGGTTATTGTATTCATGGTGAATCAAGGTTTCTTGTTTATGAATTGATGGAGAATGGATCTTTGGAAATTCAATTGCATGGGCCTAACCGAGGATCGTCTTTAACTTGGTTTCTTCGATTGAGAATTGCTGTCGATATTGCTAGGGCATTGGAATATCTCCATGAGCATTGCAATCCTCCTGTTGTTCATAGAGACCTAAAATCTTCAAATGTTCTTCTCGATTCTAACTTCAATGCCAAGTTATCAGATTTCGGACTTGCTATTGCCTCTGGAATGCAACACAAGAACATGAAGATGTCAGGAACTTTAGGATATGTGGCACCTGAGTATATATCACACGGTAAACTAACTGATAAGAGCGATGTCTATGCGTTCGGGGTTGTACTTCTAGAACTTCTAACCGGAAGAAAACCCATAGAGAACATGTCCTCACATGAATACCAATCCCTAGTCTCATGGGCCATGCCTCAGTTAACTGACAGAACAAAACTTCCAAGTATTCTTGATCCTGTTATCAGAAACACAATGGACTTGAAGCATTTATATCAGGTTGCTGCAGTGGCTGTACTATGTGTGCAACCAGAACCAAGTTATAGGCCACTAATAACAGATGTCCTACACTCCCTCATCCCTTTAGTACCTGTTGAGCTTGGAGGGTCACCCAGAGTTACTGAACCAGTTCTCTCATAG 1272 0.3907 MNLLVLFLDLHILVLTISLLSPILHASDANANAQAESPGTQDVRVVHHQNLNKKILVALIVCCVLLGGIFIFLSYVWFRRHKILRFSSSKSEGTIEAAKGETLNPIDAKLYYSRMTDKKSPVAIFDFRLLEAATNSFSKSNIMGESGSRIVYRAYFDEHFKAAVKKADSDADREFENEVSWLSKIWHQNIIKLLGYCIHGESRFLVYELMENGSLEIQLHGPNRGSSLTWFLRLRIAVDIARALEYLHEHCNPPVVHRDLKSSNVLLDSNFNAKLSDFGLAIASGMQHKNMKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGRKPIENMSSHEYQSLVSWAMPQLTDRTKLPSILDPVIRNTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPVELGGSPRVTEPVLS* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0122 423 Gene3D Transferase(Phosphotransferase) domain 1 210 408 - -
Lan3g0122 423 PANTHER OS01G0253100 PROTEIN 26 418 IPR045271 GO:0004714|GO:0006468
Lan3g0122 423 PANTHER RECEPTOR-LIKE KINASE 26 418 - -
Lan3g0122 423 Gene3D Phosphorylase Kinase; domain 1 104 209 - -
Lan3g0122 423 SUPERFAMILY Protein kinase-like (PK-like) 119 403 IPR011009 -
Lan3g0122 423 SMART serkin_6 137 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0122 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Lan3g0122 423 Pfam Protein tyrosine and serine/threonine kinase 154 366 IPR001245 GO:0004672|GO:0006468
Lan3g0122 423 ProSiteProfiles Protein kinase domain profile. 137 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0122 Lan-Chr3 835207 838955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0122 14 349 Receptor kinase-like Gene Family AT1G80640 48.824 2.70e-104 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Lan3g0122 PK_Tyr_Ser-Thr 3.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0122 - - gmx:100811491 677.937