Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0120 ATGAAGGTTATTGCTGCTTATTTGTTGGCCGTTTTGGGAGGAAACGAAACTCCTTCTGCTGCTGATATCAAAAATATCCTTGGCTCAGTTGGAGCTGAGGCTGAGGCGGAGAAGATCGAGTTTCTCTTGAACGAAGTTAAGGGCAAAAGTATTGTTGAACTAATTGCTAGTGGGAGAGAGAAATTGGCTTCAGTGCCATCCGGCGGTGGTGCCGTTGCTGTTTCTGCTGCACCTGCAGGAGGTGCTGGTGGTGGTGGTTCTGCACCTGCTGCCGAAGCAAAGGAGGAGAAGAAGGTAGAAGAGAAGGAAGAGTCAGATGATGACATGGGCTTCAGTTTATTCGACTAA 348 0.4828 MKVIAAYLLAVLGGNETPSAADIKNILGSVGAEAEAEKIEFLLNEVKGKSIVELIASGREKLASVPSGGGAVAVSAAPAGGAGGGGSAPAAEAKEEKKVEEKEESDDDMGFSLFD* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0120 115 MobiDBLite consensus disorder prediction 91 105 - -
Lan3g0120 115 Hamap 50S ribosomal protein L12 [rpl12]. 2 115 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lan3g0120 115 Gene3D - 1 59 IPR038716 -
Lan3g0120 115 MobiDBLite consensus disorder prediction 76 115 - -
Lan3g0120 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 115 - -
Lan3g0120 115 Pfam 60s Acidic ribosomal protein 18 114 - -
Lan3g0120 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lan3g0120 115 CDD Ribosomal_P2 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0120 Lan-Chr3 829466 830747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0120 1 115 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 69.565 3.33e-31 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0120 K02943 - ming:122089001 122.864