Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0114 ATGGAAACACAAGTGACTCAATCTTCCACCATCTCTATTCAAACAGAACCACCTAAGACTCAAGTGTTGGATCAGAAAATGACACATGCTAATGAAGATTCTTCTGTATTGGCATCAGAACAAAAAGTGAAAAGAAAAAGAGGAAGACCTAGGAAATATGATGTTAATGGAAATGTTTTATCATCAACATATTCAATGCCTTCAAGTGATGATCATGCAATTGGATCCTCTTCTAAAAGAAGTAGAGGAAGGCCTCGTGGTTCAACCAATAAGCATATAATAACTTCTACCCTAGCAGAAACAAGTGGTGGAAGCTTCAAACCTCATGTGATAACAGTGAATAAAGGAGAGGATGTGGTGAAAAAGATATTAGCATTTTCTGAAAAGAATGTTCCAAAGGCTGCAGTTTCAGTAATTTCTGCCACTGGTTCCGTATCAAGTGTGCTCTTTCGCAATACTAATCATTCTTCAATTCAGAAACTTGAGGGATGCTTTGAAATTGTGTCTTTATCTGGATCATATATCTTTGGTGCTGATGGTGATTCACTTTGTAAAAAGGGCATGTTCACTATTTTACTCTCTGAACCTGATGGACGTATTTTTGGAGGTATCCTTGAAAGTTCAATGATAGCCGCTACTCCTATTCAGTTAATTGTGGCCAGTTTCAAGCAAAACACAAGTAAGAAAACCATGAAAATGCAAGTTCCTTCAATAGTAGAAGCTACTAGAATACCAGCAGAGAATCTCATTCATGCAACAACAACAACAACTACTACTATTGGAGTATCAGATAATGTGATTGTTGCAAATCAGAATATGAAATCTGAACCTATAAATGGTGTTGGCTTGGATATTCAGGCCATGCAGCCAATCACAGATCAAAGTATTGGTGCAGCAGATAACAATGCCAATGTGTAG 918 0.3725 METQVTQSSTISIQTEPPKTQVLDQKMTHANEDSSVLASEQKVKRKRGRPRKYDVNGNVLSSTYSMPSSDDHAIGSSSKRSRGRPRGSTNKHIITSTLAETSGGSFKPHVITVNKGEDVVKKILAFSEKNVPKAAVSVISATGSVSSVLFRNTNHSSIQKLEGCFEIVSLSGSYIFGADGDSLCKKGMFTILLSEPDGRIFGGILESSMIAATPIQLIVASFKQNTSKKTMKMQVPSIVEATRIPAENLIHATTTTTTTIGVSDNVIVANQNMKSEPINGVGLDIQAMQPITDQSIGAADNNANV* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0114 305 PRINTS AT-hook-like domain signature 44 54 IPR017956 GO:0003677
Lan3g0114 305 PRINTS AT-hook-like domain signature 77 88 IPR017956 GO:0003677
Lan3g0114 305 PANTHER DUF296 DOMAIN PROTEIN 7 279 - -
Lan3g0114 305 Pfam Plants and Prokaryotes Conserved (PCC) domain 107 223 IPR005175 -
Lan3g0114 305 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 279 IPR039605 GO:0003680
Lan3g0114 305 CDD DUF296 107 222 IPR005175 -
Lan3g0114 305 SMART AT_hook_2 79 91 IPR017956 GO:0003677
Lan3g0114 305 SMART AT_hook_2 44 56 IPR017956 GO:0003677
Lan3g0114 305 MobiDBLite consensus disorder prediction 1 37 - -
Lan3g0114 305 MobiDBLite consensus disorder prediction 1 91 - -
Lan3g0114 305 ProSiteProfiles PPC domain profile profile. 103 245 IPR005175 -
Lan3g0114 305 MobiDBLite consensus disorder prediction 56 74 - -
Lan3g0114 305 SUPERFAMILY AF0104/ALDC/Ptd012-like 104 231 - -
Lan3g0114 305 Gene3D - 107 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0114 Lan-Chr3 792400 795537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0114 43 232 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 38.095 1.13e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0114 - - lang:109342242 578.556