Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0101 ATGAAAGTTCCAAAATGGGTAGAACATCTTTTGTCTACTACATTTTTCTCAGCATGTGAAATCCACACCAAACATAGGAATGAGTGCAACAAATATTGCATCGATTGTACGGACGAGGCATTTTGCTCTCATTGTGTTCCAAATACCCATAAGGGTCATCATGTTATTCAAATAAGGAGGTCATCATATGAAGAATGTGTGAGAGTGGAAGATCTTCAAAAAGCTTTAGACATTAATGGAGTTCAGACATTTGTGATCAATAGTGCTAAAGTTATTTTTCTAAACAAGAGGGGTCGTTGTGTGTCTCAGACAAAAAACAATGGTGGTGGTAATTTAAGAAACAACCTTTGCAAAAACACTACCGAGTGTATGACATGTGAAAGAACTCTCCTAGAACCTTTTTGTTTCTGCTCAATAGAATGCAAGTTTGAATGGATAAAGAATGATGAGAGTGGTAAATTCTTCTTAAGTGTGAAAAACAAAGAAGAAATGGAGACAATGTGTGAAGAAATGCCAACATTGGCATCAAAAGAAAAGGACAAAGACTTTGAAGAAGAAACCAACAAAGAAGTGTCCCAAAATGAGATTGATATTCCTCCTGCTAGGCCAGTGTCCTACAATTCAAGGAAAAGAAAGGGAATACCTTGTAGGGCACCCTTTTTTTAA 666 0.3649 MKVPKWVEHLLSTTFFSACEIHTKHRNECNKYCIDCTDEAFCSHCVPNTHKGHHVIQIRRSSYEECVRVEDLQKALDINGVQTFVINSAKVIFLNKRGRCVSQTKNNGGGNLRNNLCKNTTECMTCERTLLEPFCFCSIECKFEWIKNDESGKFFLSVKNKEEMETMCEEMPTLASKEKDKDFEEETNKEVSQNEIDIPPARPVSYNSRKRKGIPCRAPFF* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0101 221 Pfam PLATZ transcription factor 59 142 IPR006734 -
Lan3g0101 221 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 220 - -
Lan3g0101 221 Coils Coil 174 194 - -
Lan3g0101 221 MobiDBLite consensus disorder prediction 177 221 - -
Lan3g0101 221 PANTHER OS08G0560300 PROTEIN 1 220 - -
Lan3g0101 221 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Lan3g0101 221 MobiDBLite consensus disorder prediction 177 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0101 Lan-Chr3 705663 707105 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lan3g0101 PLATZ 2.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0101 - - lang:109342505 455.292