Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0072 ATGGAAAATTTGTTCGATAAGTTATCGCCGATGGATCTGATGCGATCCGAGAAGATGAGCTTCGTTCAGCTCATCATTCCCGCTGAGTCTTCTCACCGTGCCATTTCCTATTTAGGACAACTCTCTCTCCTTCAATTCCGTGACTTAAATGCCGATAAAAGCCCCTTCCAGAGGACGTTTGTTAATCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTTCGATTCTTCAAGGATCAAATCAATAAAGCTGGTTTACTGTCTTCCTCTCTTCCTGTATTGCAACCGGACATTGATTTGGAGGATTTAGAGATACAACTTGCTGAGCATGAACATGAGCTAATTGAAATGAACTCCAACAGTGACAAACTCCGGCAATCATATAATGAACTTCTGGAATTCAAGATTGTATTGCAGAAGGCTTGTGGTTTTCTTATTTCAAGTCATGGCCGTGCTGTTTCAGAAGAGAGAGAACTACAAGAGAATGTATACTCAAATGATGAATATGTTGAGAATGCATCTTTACTTGAACAGGAAATGAGGCCTGGACCATCAAACCAATCTGGTTTAAGATTTATCAGTGGCATAATTTGTAAATCCAAGATTCTTAGGTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAAGCACCAGCAGATGAACAAATCATGGATCCTGTTTCAACTGAGATGATTGAGAAAACAGTTTTCGTTGTCTTCTTCTCCGGGGAACAGGCAAGAACAAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTACCCTGTTCCTGAAGATATAACTAAGCAGAGGCAAATAACTAGAGAGGTTTCATCACGTCTTACGGACTTAGAGGCAACTTTGGATGCTGGGATTAGGCACCGGAGTAAGGCTCTAGCTTCTCTAGGGGTTCATCTAGCACAATGGATGAGCATGGTAAGAAGAGAGAAAGCCGTGTATGACACTCTGAACATGTTAAATTTTGATGTCACAAAAAAATGTCTTGTCGGAGAGGGCTGGTGCCCTACTTTTGGAAAAACACAGATTCAGGAGGCACTGCAACGTGCATCTTTTGATAGCAGTTCTGAAGTTGGCATAATCTTCCATCCAATGGATTCAGTGGAATCACCACCTACATATTTTAGGACCAACAGTTTCACAAGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCGAGATACCAAGAAGCAAATCCTGCAGTGTACACAACTATTATATTCCCCTTCTTATTTGCGGTGATGTTTGGAGACTGGGGTCATGGAATTTGCCTGCTGCTGGGAGCACTAGTTCTTATAGCTCGTGAAAGCAAGCTCAACACTCAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGCGGGCGCTATGTGCTTCTTTTGATGTCACTATTTTCAATCTATTGTGGGTTAATCTACAATGAGTTCTTTTCTGTTCCTTTTCACATATTTGGTGCATCTGCTTATAAATGCCGAGATAGTTCATGCAGGGATGCACATACTATTGGCCTAGTCAAATACCAAGAGCCATACCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGGCTTTTCTGAATTCTTTGAAGATGAAGATGTCCATTCTGTTTGGTGTGGTGCATATGAACTTAGGAATCATATTAAGTTATTTCAATGCTCGTTTCTTTGGAAGCTCACTGGATATAAGGTACCAGTTTGTGCCACAGGTGATTTTCCTCAACAGTCTATTTGGGTATCTTTCCCTTCTCATTGTTGTTAAGTGGTGTACAGGCTCTCAGGCAGATCTTTATCATGTTATGATATACATGTTTTTAAGCCCCACAGACAAACTTGGTGATAATCAGCTGTTCTGGGGCCAGAGACCACTTCAAATTGTGTTATTGCTTTTGGCTCTAATTGCAGTTCCGTGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTTATACTGAGAGATTTCAAGGTCGCAGTTATGGTTTGCTTAATAACTCTGAGATGGACCTTGAGGTAGAGCCAGATTCTGCCAGGCAACATCATCATGAAGAATTCAATTTCACAGAGGTCTTTGTTCACCAGATGATCCACTCCATTGAGTTTGTTCTAGGTTCTGTTTCAAATACAGCTTCATATCTTCGACTTTGGGCATTAAGTTTGGCTCACTCGGAACTTTCTACTGTTTTCTATGAGAAAGTCTTGCTTCTTGCTTGGGGGTATGATAATCTTGTTATTCGGTTAGTGGGACTAGCTGTTTTTGCCTTTGCAACTGCCTTCATATTACTAATGATGGAATCTCTTAGTGCTTTTCTTCATGCCCTACGTCTCCATTGGGTAGAATTTCAAAATAAATTCTACCATGGTGACGGCTACAAGTTCAAGCCTTTTTCCTTCGCCTCCTTAATAGATGATGATGATTGA 2463 0.4076 MENLFDKLSPMDLMRSEKMSFVQLIIPAESSHRAISYLGQLSLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLLSSSLPVLQPDIDLEDLEIQLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFLISSHGRAVSEERELQENVYSNDEYVENASLLEQEMRPGPSNQSGLRFISGIICKSKILRFERMLFRATRGNMLFNQAPADEQIMDPVSTEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDITKQRQITREVSSRLTDLEATLDAGIRHRSKALASLGVHLAQWMSMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPTFGKTQIQEALQRASFDSSSEVGIIFHPMDSVESPPTYFRTNSFTSPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALVLIARESKLNTQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGASAYKCRDSSCRDAHTIGLVKYQEPYPFGVDPSWRGSRSELAFLNSLKMKMSILFGVVHMNLGIILSYFNARFFGSSLDIRYQFVPQVIFLNSLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPTDKLGDNQLFWGQRPLQIVLLLLALIAVPWMLFPKPFILKKLYTERFQGRSYGLLNNSEMDLEVEPDSARQHHHEEFNFTEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFKPFSFASLIDDDD* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0072 820 PIRSF ATP6V0A1 9 820 IPR026028 GO:0000220|GO:0046961
Lan3g0072 820 Coils Coil 100 127 - -
Lan3g0072 820 PANTHER VACUOLAR PROTON ATPASES 6 820 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lan3g0072 820 Pfam V-type ATPase 116kDa subunit family 37 812 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lan3g0072 820 PANTHER VACUOLAR PROTON ATPASE A1 6 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0072 Lan-Chr3 475935 487202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0072 1 813 Primary Pumps ATPases(2) AT2G28520 80.123 0.0 1362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0072 K02154 - gmx:100776037 1498.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0119 10 723627 735663 Lan3g0072 3 475935 487202 LSH
Lan3g0072 3 475935 487202 Lan13g0361 13 2403463 2411856 PCT
Lan13g0361 13 2403463 2411856 Lan3g0072 3 475935 487202 PCT