Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0055 ATGGTAAAGGAACACTTGATTTCTTCTGAGAAGACCAATGTTGAAATTGAGGGCAATAATAATAATAATAATAATAGTCATTCAAGATACATGAGGGATAAGAGAAAAACAGATTTGGATAACCACACCGGAAATCAACAAAATGGAGATGCAGAAGCAAAATCCCTCCCTGTCAGGAAACATGGCAAAAAGTTGAGTGCTAAAGGGAAAAGTTGCCCGAAAAATCACAAGGGACAGTGCACCAAAGAGTGTCTACATTTAGAGTCCTCAGGAGAAAACCAGGCCAATAGTGAGAGTGCACTTGATTTGGAGGAAGATGGCAAGTCAAAACAAGAAGCTTCTCTTAACCAAACACAATTGGAATCAAACAAGCTTAAGAGAGACATTTCCGATAAACTTGATAAGCATAGTGATAGTTTGGAGATACTTGGCATGGAGAACGATTTAGTCCTCAAGTTTCAAGGAGATTTAGATGTCGGCGGGGAAAATCTCCATCAAACTTCCAACGAGAAACATTTGACAAAATCAGAGTCATTTCCTTTAACCAGATATTCAATGATGAGAAGGATGAATACTCCTACCTTTAGACACAAGCAAACTGAAATTTGGGCCTTCTCCAAGGGAGAAAAGTTGCTTGCCGGTGCTCAAGCACCAAAAATGTCTGCATCTAGTTTTGTAGAAGATATTTCTTATGAGAAGCAAATGAAACAAAAGCAAAACATTTATTCACGGTTTTCTCAAGGATTAAATCACAAAGGGTGGAATCAAATGGTTCTTCATAGCTTCAGAGTCATAAAGCAGAAGATAAAAAATGCTCTTTCTGAAGCAATCTACCATGTAGCTTCACCTGAATATAGTAGTACCAATGATGAGAAAGAGGTCTCAGAAATCGTAGATGCTGGCGTGATTCGAGAGTGCGAAAAGACTGAAAGCTCAAATGAGATTAAAACTTCTGATTATGTTTCCAACAAAGATGAAGCTGGCCTCATCCAAAGAACATCCTCTCTAGATGGATCGCTAGACAAATATACCGAGTTGTTTGAGAAAATCTTCAGTAAAGATGCCAATAAGTATAAATGCTTAAATTTAATAAATGAAGATAAGGTTCTCAAGAGTGGAAGTGCTTCTAATTTATCCAGAAGAAATTACTCTCTGCCTTGTCTCGAGTCTTTAGGCTTCATCCTACATGAGGTACTTCGTGATAGGAATATAGGGCATACATTGGAAACTGATAATCGTGTTCAAAGAAAATCACTGAGTTCTTCTTTACAAACTGCCAAGTCACTTGATCGGATTGAGGAGACTGAAATCGTGGAAACAGTAGAAGGAGATGGCAGAGATGTGAACTCTGGTCTTTTATCTGGTAAGATTGTGGACAAAATTGATGAAGGAATTGCCTGTGATCAAAGGGAGAACATACATGAGATAGCATGGGAAGATGGAAGTTTCCTCAATGAAAATGTGGAAATAAGTAAGACTATATATCCTAGCAAGGAGGTAGTAGCATCTTTCGAAGCTATCTGCGAAGACAATACGACCATCCACGCCGAAGGTGGAGAATTGAATCCGCGAAGCTCTGGCATGGAAGAATCGGAGAGTGACAACCATTTCCTGCTCCATAAATCAGGTACAGAGAATGATTCCAATTTCAAATACGTGAAAAAGATTCTTGAAGTTTCTGGCTTCATGGGAAATGAGCAGAATCAAATGTGGCATACATTAAACCAGCCTATAAAGCCTTCGTTACGTAAGGATTTGGAAAATGAAATTGAATCTTATGGAGAAGAGATTGCAAGCCACTATGATCACCAGCTTCTATTCAACTTAGTTAATGAAGTGCTCCTTGAAATAGATCAGATATCACCAACTTACTTCCCTGTACCCTTCTCCTTCAACAAAAAAACTCGTCCAATGCCGAAGGGGAACTATCTTCTTAATGATGTATGGACTATTGTTAACTCATACCTGAGCTTGAGACCAGAACTAGATCAGACATTAGACGATGTTATAAGTCGCGATTTGGCTAAAGGAAGTGTATGGATGAACCTCCAACAGGAAGAGGAGTATGTTGGACTTGAACTTGAAGAGATGATTGTGGATGATTTATTAGATGAACTTGTCTTCTCATGA 2130 0.3864 MVKEHLISSEKTNVEIEGNNNNNNNSHSRYMRDKRKTDLDNHTGNQQNGDAEAKSLPVRKHGKKLSAKGKSCPKNHKGQCTKECLHLESSGENQANSESALDLEEDGKSKQEASLNQTQLESNKLKRDISDKLDKHSDSLEILGMENDLVLKFQGDLDVGGENLHQTSNEKHLTKSESFPLTRYSMMRRMNTPTFRHKQTEIWAFSKGEKLLAGAQAPKMSASSFVEDISYEKQMKQKQNIYSRFSQGLNHKGWNQMVLHSFRVIKQKIKNALSEAIYHVASPEYSSTNDEKEVSEIVDAGVIRECEKTESSNEIKTSDYVSNKDEAGLIQRTSSLDGSLDKYTELFEKIFSKDANKYKCLNLINEDKVLKSGSASNLSRRNYSLPCLESLGFILHEVLRDRNIGHTLETDNRVQRKSLSSSLQTAKSLDRIEETEIVETVEGDGRDVNSGLLSGKIVDKIDEGIACDQRENIHEIAWEDGSFLNENVEISKTIYPSKEVVASFEAICEDNTTIHAEGGELNPRSSGMEESESDNHFLLHKSGTENDSNFKYVKKILEVSGFMGNEQNQMWHTLNQPIKPSLRKDLENEIESYGEEIASHYDHQLLFNLVNEVLLEIDQISPTYFPVPFSFNKKTRPMPKGNYLLNDVWTIVNSYLSLRPELDQTLDDVISRDLAKGSVWMNLQQEEEYVGLELEEMIVDDLLDELVFS* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0055 709 MobiDBLite consensus disorder prediction 12 27 - -
Lan3g0055 709 MobiDBLite consensus disorder prediction 1 122 - -
Lan3g0055 709 Pfam Domain of unknown function (DUF4378) 550 705 IPR025486 -
Lan3g0055 709 PANTHER PROTEIN TRM32 24 709 IPR044257 -
Lan3g0055 709 Coils Coil 583 603 - -
Lan3g0055 709 Coils Coil 108 135 - -
Lan3g0055 709 PANTHER PROTEIN TRM32 24 709 - -
Lan3g0055 709 MobiDBLite consensus disorder prediction 86 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0055 Lan-Chr3 371849 374741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0055 132 707 TRM (TON1 Recruiting Motif) Superfamily AT1G07620 26.746 8.90e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0055 - - lang:109351072 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1977 6 30671595 30675305 Lan3g0055 3 371849 374741 LSH